| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693264
Identifier: 213693264
GI number: 213693264
Start: 2709052
End: 2710473
Strand: Direct
Name: 213693264
Synonym: Blon_2418
Alternate gene names: NA
Gene position: 2709052-2710473 (Clockwise)
Preceding gene: 213693262
Following gene: 213693269
Centisome position: 95.63
GC content: 57.45
Gene sequence:
>1422_bases ATGGCTGATTCCATCGGAACAGTCAACAACCAATCTTCAACACAGCCCAACGGTCACAATTCACATAGCAACACCACCGA GTCGCTATGGCGCGGCACGGATTATGGCAAATGGTTCGTAGCGGATTCATGCACGTCGCTGTCATCAAGTATCCAAGGTT TCGCAATGCCACTCATCGCGCAGACCGTCACGGGCTCACCGGCACAGGCGACGCTGCTGGATTCAATCATGACCATGATA TCGTCGGTATTGCGGCTGCCAGGTGGCGTGGTACAAGATAAGTACGACCGCAAAAAACTTATGATTGCGTTCGGCCTGAT TGGTTTCGCACTGTTCGGCATATGCACGGCCCTAGGATGGGCGGGATTACTCATATACCCGGTGCTGATGGTACTTGCGA TATGCCTCGGCATACGCTCAGGCCTCCTAGGAACCACGAGCAACACGATGCTACGAGGCATCGTTCCCGATCAATTGCTG CCCAAGGCGTCAAGCCTCAATGATGGCCGCGATGCCGCCCTCGAACTCGCCGGCGCACCAGTAGGTGGCGTATTGATCGG CGGCGGTCTATGGCTGCCATTCGCAGTCAGCGCGCTGCTGAATCTATTGGAAACCGCTGCGGCGATGCGGATCACAAAAT ACTGGCATCGTGGCGGGCGGACCAATACGGAGGGCCGCGCCCTTGCCGACGATGAGGCCGATGAGAATGGCGATGCGGCC AACATCACTCAGGCCGCTGACGAGCAGGCAACGACCACGATATCATCCGCGTCACAGTATTGGCGTGAGATGTTTTCCGG ATTCCGCTGGCTTCTTAGCGAGCGATTCGAACGTCGCCTGATTTTGTCGAGCGCGCTGGCGTTCGCGTGCTTCAACTCGT TCCTGCTGATTACGGTGCTCTCGATCGGCTCCGACCCATCACATGTGGTGTCAGCCAGTTTCATGAACGTTTCTGTGTCT GTGGGCGTCATCGTTGGCTCGCTCATCTCTTCCGTGCTGGTTCAGCATGTGCGCGGCGGCATAGTCGCCGTATCGTTCTA CGTGCTGATGAGCATCGGCGCGCTCGGCGCAGCGCTGGCTCCGTGGATTCTTGCGCGCATGGCGTTTCTGGCAATTTCGC TGCTGGCCCTACCGGCCGGCAATGCGGTAATCAACGGATTCCAATCATTGCTCATCAACAAGGAGCATATGGGCCGCGTA TTCGCCGGCATGGGCATGATTGAGACGATTGCTGCCCCGGTGATCACATTTCTGTCCGGCATCGCCATGCAACACTGGGG TTACTCAGTCACGTCCGTGGCTTTGGGCTTGTGCATCGTGGCGGCCGCGATCCCTGCCGTGACAATGAGGGAACTGGTCA CACTGCCTAAGCCGGATGGCTGGGAGGACCATATCCGCAAATCCGGGCTCACCAAGTTCTGA
Upstream 100 bases:
>100_bases AAGGCGTCGCGGTATTGGCCGGGGGTGAGTCCGGTGCGGCGCTTGAAGACGAGCATAATAGAATATCTCAAGCATCGATG AATACGAGGAGATGATCACA
Downstream 100 bases:
>100_bases CAACAAGTAAGGGCGACTATCTCCCGGATTTGTGACGCTCGGCAACCGTCAGCGTCACAAATCCGGGAAGAGGAAGGTGG ATACGGTTTCAGCCGCGCGG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Transporter
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MADSIGTVNNQSSTQPNGHNSHSNTTESLWRGTDYGKWFVADSCTSLSSSIQGFAMPLIAQTVTGSPAQATLLDSIMTMI SSVLRLPGGVVQDKYDRKKLMIAFGLIGFALFGICTALGWAGLLIYPVLMVLAICLGIRSGLLGTTSNTMLRGIVPDQLL PKASSLNDGRDAALELAGAPVGGVLIGGGLWLPFAVSALLNLLETAAAMRITKYWHRGGRTNTEGRALADDEADENGDAA NITQAADEQATTTISSASQYWREMFSGFRWLLSERFERRLILSSALAFACFNSFLLITVLSIGSDPSHVVSASFMNVSVS VGVIVGSLISSVLVQHVRGGIVAVSFYVLMSIGALGAALAPWILARMAFLAISLLALPAGNAVINGFQSLLINKEHMGRV FAGMGMIETIAAPVITFLSGIAMQHWGYSVTSVALGLCIVAAAIPAVTMRELVTLPKPDGWEDHIRKSGLTKF
Sequences:
>Translated_473_residues MADSIGTVNNQSSTQPNGHNSHSNTTESLWRGTDYGKWFVADSCTSLSSSIQGFAMPLIAQTVTGSPAQATLLDSIMTMI SSVLRLPGGVVQDKYDRKKLMIAFGLIGFALFGICTALGWAGLLIYPVLMVLAICLGIRSGLLGTTSNTMLRGIVPDQLL PKASSLNDGRDAALELAGAPVGGVLIGGGLWLPFAVSALLNLLETAAAMRITKYWHRGGRTNTEGRALADDEADENGDAA NITQAADEQATTTISSASQYWREMFSGFRWLLSERFERRLILSSALAFACFNSFLLITVLSIGSDPSHVVSASFMNVSVS VGVIVGSLISSVLVQHVRGGIVAVSFYVLMSIGALGAALAPWILARMAFLAISLLALPAGNAVINGFQSLLINKEHMGRV FAGMGMIETIAAPVITFLSGIAMQHWGYSVTSVALGLCIVAAAIPAVTMRELVTLPKPDGWEDHIRKSGLTKF >Mature_472_residues ADSIGTVNNQSSTQPNGHNSHSNTTESLWRGTDYGKWFVADSCTSLSSSIQGFAMPLIAQTVTGSPAQATLLDSIMTMIS SVLRLPGGVVQDKYDRKKLMIAFGLIGFALFGICTALGWAGLLIYPVLMVLAICLGIRSGLLGTTSNTMLRGIVPDQLLP KASSLNDGRDAALELAGAPVGGVLIGGGLWLPFAVSALLNLLETAAAMRITKYWHRGGRTNTEGRALADDEADENGDAAN ITQAADEQATTTISSASQYWREMFSGFRWLLSERFERRLILSSALAFACFNSFLLITVLSIGSDPSHVVSASFMNVSVSV GVIVGSLISSVLVQHVRGGIVAVSFYVLMSIGALGAALAPWILARMAFLAISLLALPAGNAVINGFQSLLINKEHMGRVF AGMGMIETIAAPVITFLSGIAMQHWGYSVTSVALGLCIVAAAIPAVTMRELVTLPKPDGWEDHIRKSGLTKF
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50059; Mature: 49928
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADSIGTVNNQSSTQPNGHNSHSNTTESLWRGTDYGKWFVADSCTSLSSSIQGFAMPLIA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QTVTGSPAQATLLDSIMTMISSVLRLPGGVVQDKYDRKKLMIAFGLIGFALFGICTALGW HHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLLIYPVLMVLAICLGIRSGLLGTTSNTMLRGIVPDQLLPKASSLNDGRDAALELAGAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCHHHHHHHCCCC VGGVLIGGGLWLPFAVSALLNLLETAAAMRITKYWHRGGRTNTEGRALADDEADENGDAA CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NITQAADEQATTTISSASQYWREMFSGFRWLLSERFERRLILSSALAFACFNSFLLITVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGSDPSHVVSASFMNVSVSVGVIVGSLISSVLVQHVRGGIVAVSFYVLMSIGALGAALA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PWILARMAFLAISLLALPAGNAVINGFQSLLINKEHMGRVFAGMGMIETIAAPVITFLSG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMQHWGYSVTSVALGLCIVAAAIPAVTMRELVTLPKPDGWEDHIRKSGLTKF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure ADSIGTVNNQSSTQPNGHNSHSNTTESLWRGTDYGKWFVADSCTSLSSSIQGFAMPLIA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH QTVTGSPAQATLLDSIMTMISSVLRLPGGVVQDKYDRKKLMIAFGLIGFALFGICTALGW HHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AGLLIYPVLMVLAICLGIRSGLLGTTSNTMLRGIVPDQLLPKASSLNDGRDAALELAGAP HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCHHHHHHHCCCC VGGVLIGGGLWLPFAVSALLNLLETAAAMRITKYWHRGGRTNTEGRALADDEADENGDAA CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC NITQAADEQATTTISSASQYWREMFSGFRWLLSERFERRLILSSALAFACFNSFLLITVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIGSDPSHVVSASFMNVSVSVGVIVGSLISSVLVQHVRGGIVAVSFYVLMSIGALGAALA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH PWILARMAFLAISLLALPAGNAVINGFQSLLINKEHMGRVFAGMGMIETIAAPVITFLSG HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAMQHWGYSVTSVALGLCIVAAAIPAVTMRELVTLPKPDGWEDHIRKSGLTKF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA