| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693242
Identifier: 213693242
GI number: 213693242
Start: 2678342
End: 2679046
Strand: Direct
Name: 213693242
Synonym: Blon_2395
Alternate gene names: NA
Gene position: 2678342-2679046 (Clockwise)
Preceding gene: 213693241
Following gene: 213693248
Centisome position: 94.55
GC content: 59.86
Gene sequence:
>705_bases ATGACCGGATATATTCCCACACTGGAGCAGATCGACGAATTGCACCGCAAAATCGCGCCGTCCAAGGCGGCGTACGAGCT GGTGCACACGCATTGCGTGATTGTGGCGACCATCGGCTGCCAGATCGTGCGCCGGCAGAACGCGCTGTTCACGCGCCGCT GCACATTACCGAAGGACGCGGAGGTACCGCCCACCGCAGGCGTCACCGGCGGTCATGTGCCGCCGCGTCTGCTCGATGAG CATTTGGTACTCATCGGCGGACTGCTGCATGACATCGGCACCTACCGCGTGTTCAAGCATGACGGCTCTGACGGCGAACC GCTCAAATTCAGCAAGAAACGCTACATTCTGCACGGTCTTAAGGGCTACGAGTATCTGCTCGACGAGGGCGTGGACGAGT CCATCGCCCAGTTCTGCCGCAACCATACCGGCGTGGGACTTACGCGCGAGGATGTGGTGTGCCAGGAGCTGCCGTTGCCA CCAGCCGACTATGTGCCGATGAATCTCGAGCAGGAAGTGGTGATGTACGCCGACAAGTTCCATAGCAAGTCAGTGCCGCC GAAGTTCCTGCAGGTCGAGGCGTATACGGCCCGAGCCGAGCGATTTGGCGGAGAGAACAAACAGCGATGGCTGGATCTGG TGGCCAAGTATGGCATGCCGGATATTCCGGCGTTGGCGGAGAAGTATGGGATGCGGATGATTTGA
Upstream 100 bases:
>100_bases TGATTCGTATTGCCGAATCACAGGGGTTTTTCAATGCCACGGCTCATTGCCGCGCTAATCTGAGGATAAATCTGACCGTA CGAGGCGAAACCTGATAATC
Downstream 100 bases:
>100_bases GGCTCAAGGCCCTCGTCAGAGACGGCTTATGAAGCTATTTCAGATGGAACGGAGACGGTAGGTGCCGTTGCGGTTGGAGG CGATGATCATCTGGTCGTTC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTGYIPTLEQIDELHRKIAPSKAAYELVHTHCVIVATIGCQIVRRQNALFTRRCTLPKDAEVPPTAGVTGGHVPPRLLDE HLVLIGGLLHDIGTYRVFKHDGSDGEPLKFSKKRYILHGLKGYEYLLDEGVDESIAQFCRNHTGVGLTREDVVCQELPLP PADYVPMNLEQEVVMYADKFHSKSVPPKFLQVEAYTARAERFGGENKQRWLDLVAKYGMPDIPALAEKYGMRMI
Sequences:
>Translated_234_residues MTGYIPTLEQIDELHRKIAPSKAAYELVHTHCVIVATIGCQIVRRQNALFTRRCTLPKDAEVPPTAGVTGGHVPPRLLDE HLVLIGGLLHDIGTYRVFKHDGSDGEPLKFSKKRYILHGLKGYEYLLDEGVDESIAQFCRNHTGVGLTREDVVCQELPLP PADYVPMNLEQEVVMYADKFHSKSVPPKFLQVEAYTARAERFGGENKQRWLDLVAKYGMPDIPALAEKYGMRMI >Mature_233_residues TGYIPTLEQIDELHRKIAPSKAAYELVHTHCVIVATIGCQIVRRQNALFTRRCTLPKDAEVPPTAGVTGGHVPPRLLDEH LVLIGGLLHDIGTYRVFKHDGSDGEPLKFSKKRYILHGLKGYEYLLDEGVDESIAQFCRNHTGVGLTREDVVCQELPLPP ADYVPMNLEQEVVMYADKFHSKSVPPKFLQVEAYTARAERFGGENKQRWLDLVAKYGMPDIPALAEKYGMRMI
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004454 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26326; Mature: 26195
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGYIPTLEQIDELHRKIAPSKAAYELVHTHCVIVATIGCQIVRRQNALFTRRCTLPKDA CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCC EVPPTAGVTGGHVPPRLLDEHLVLIGGLLHDIGTYRVFKHDGSDGEPLKFSKKRYILHGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHC KGYEYLLDEGVDESIAQFCRNHTGVGLTREDVVCQELPLPPADYVPMNLEQEVVMYADKF CHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH HSKSVPPKFLQVEAYTARAERFGGENKQRWLDLVAKYGMPDIPALAEKYGMRMI CCCCCCCHHEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCC >Mature Secondary Structure TGYIPTLEQIDELHRKIAPSKAAYELVHTHCVIVATIGCQIVRRQNALFTRRCTLPKDA CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCC EVPPTAGVTGGHVPPRLLDEHLVLIGGLLHDIGTYRVFKHDGSDGEPLKFSKKRYILHGL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHC KGYEYLLDEGVDESIAQFCRNHTGVGLTREDVVCQELPLPPADYVPMNLEQEVVMYADKF CHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH HSKSVPPKFLQVEAYTARAERFGGENKQRWLDLVAKYGMPDIPALAEKYGMRMI CCCCCCCHHEEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]