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The map label for this gene is yclH [H]

Identifier: 213693241

GI number: 213693241

Start: 2677479

End: 2678219

Strand: Direct

Name: yclH [H]

Synonym: Blon_2394

Alternate gene names: 213693241

Gene position: 2677479-2678219 (Clockwise)

Preceding gene: 213693240

Following gene: 213693242

Centisome position: 94.52

GC content: 63.16

Gene sequence:

>741_bases
ATGACGCTGGCCTCGCGTATCGATCGCGTGTTGGTGGGCGGCGGTTCCGACGACATTCTGCTCAAGACCTACCCGACCTT
TGCCCTGAACAAGGTGACGGTCGCCGGCCCCAAGGGCAAGGTCAACATCCTCGATGACGCGAATTTCTCCTGCTATTCCG
GGCACGCATACGCGCTGCTGATCAGCGACGACCCCGATTCGGGCATCACCGCCGACGCCAAGCGTCGCGCGCTGATGGGC
GTGATGAGCGGTTTGACCACGCCGGCGTCTGGCACGGTGATGAACAAGAGCGCCAACATTGTTGAGCTCGAGCCCGTGGA
ACTACGCGGCCACCGTCTGGGCATCGTACCGCAGCTGCACGCCGTGCAACCGAATCTCGACGCCGAACAAAACGTGCGGT
ACGCCATGAATGCGTCCAACCGCAACTTCCTGAAGCCCAAGCCGGTGATCGCCCGCGAACTGCTGGCCAAGGTCGGCTTC
TCCGAGGCCACCAGCGGCGTGGCCGTCGGCACGTTGCCTTTGGTGCAGCAGCGTTTGGTGGCCATCGCCCGTGCAATCAG
CACCGAGGCCGAAGTGCTAATCCTCGACGAGCCGACACGAGGGCTGAACGCGGATGACGAGGTGACCGTGTTCGCCGCGC
TGGCCAAGCTGGCGCACACCGGTGACCCGAAGCATTGCGTTATCGTGCTCACTGCGTCACGCGAGATCGCCGAAGCAGCC
GACACACTCTTCAAGATCTGA

Upstream 100 bases:

>100_bases
TGCCGCCCGCGTCAACGAAACACTCCGACTGGCCAAAACCGATCACAAAGACGCATTGGCCGAGCATGCGGAGCCTCAGG
GCAAAGCGACCGATCCCACC

Downstream 100 bases:

>100_bases
TGTTCAGACCATAGAACCCCTGTGATTCGTATTGCCGAATCACAGGGGTTTTTCAATGCCACGGCTCATTGCCGCGCTAA
TCTGAGGATAAATCTGACCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTLASRIDRVLVGGGSDDILLKTYPTFALNKVTVAGPKGKVNILDDANFSCYSGHAYALLISDDPDSGITADAKRRALMG
VMSGLTTPASGTVMNKSANIVELEPVELRGHRLGIVPQLHAVQPNLDAEQNVRYAMNASNRNFLKPKPVIARELLAKVGF
SEATSGVAVGTLPLVQQRLVAIARAISTEAEVLILDEPTRGLNADDEVTVFAALAKLAHTGDPKHCVIVLTASREIAEAA
DTLFKI

Sequences:

>Translated_246_residues
MTLASRIDRVLVGGGSDDILLKTYPTFALNKVTVAGPKGKVNILDDANFSCYSGHAYALLISDDPDSGITADAKRRALMG
VMSGLTTPASGTVMNKSANIVELEPVELRGHRLGIVPQLHAVQPNLDAEQNVRYAMNASNRNFLKPKPVIARELLAKVGF
SEATSGVAVGTLPLVQQRLVAIARAISTEAEVLILDEPTRGLNADDEVTVFAALAKLAHTGDPKHCVIVLTASREIAEAA
DTLFKI
>Mature_245_residues
TLASRIDRVLVGGGSDDILLKTYPTFALNKVTVAGPKGKVNILDDANFSCYSGHAYALLISDDPDSGITADAKRRALMGV
MSGLTTPASGTVMNKSANIVELEPVELRGHRLGIVPQLHAVQPNLDAEQNVRYAMNASNRNFLKPKPVIARELLAKVGFS
EATSGVAVGTLPLVQQRLVAIARAISTEAEVLILDEPTRGLNADDEVTVFAALAKLAHTGDPKHCVIVLTASREIAEAAD
TLFKI

Specific function: Probably Part Of A Binding-Protein-Dependent Transport System Ego/Ydeyz. Probably Responsible For Energy Coupling To The Transport System. This Protein Is Essential For Aerobic Growth. [C]

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787792, Length=183, Percent_Identity=30.6010928961749, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787105, Length=231, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26121; Mature: 25990

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLASRIDRVLVGGGSDDILLKTYPTFALNKVTVAGPKGKVNILDDANFSCYSGHAYALL
CCHHHHCCEEEECCCCCCEEEEECCCEEECEEEEECCCCCEEEEECCCCEEECCCEEEEE
ISDDPDSGITADAKRRALMGVMSGLTTPASGTVMNKSANIVELEPVELRGHRLGIVPQLH
EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCEECCCEECCCCCEE
AVQPNLDAEQNVRYAMNASNRNFLKPKPVIARELLAKVGFSEATSGVAVGTLPLVQQRLV
ECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHH
AIARAISTEAEVLILDEPTRGLNADDEVTVFAALAKLAHTGDPKHCVIVLTASREIAEAA
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
DTLFKI
HHHHCC
>Mature Secondary Structure 
TLASRIDRVLVGGGSDDILLKTYPTFALNKVTVAGPKGKVNILDDANFSCYSGHAYALL
CHHHHCCEEEECCCCCCEEEEECCCEEECEEEEECCCCCEEEEECCCCEEECCCEEEEE
ISDDPDSGITADAKRRALMGVMSGLTTPASGTVMNKSANIVELEPVELRGHRLGIVPQLH
EECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCEECCCEECCCCCEE
AVQPNLDAEQNVRYAMNASNRNFLKPKPVIARELLAKVGFSEATSGVAVGTLPLVQQRLV
ECCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHH
AIARAISTEAEVLILDEPTRGLNADDEVTVFAALAKLAHTGDPKHCVIVLTASREIAEAA
HHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
DTLFKI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]