| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693022
Identifier: 213693022
GI number: 213693022
Start: 2402174
End: 2403457
Strand: Direct
Name: 213693022
Synonym: Blon_2169
Alternate gene names: NA
Gene position: 2402174-2403457 (Clockwise)
Preceding gene: 213693018
Following gene: 213693023
Centisome position: 84.8
GC content: 62.07
Gene sequence:
>1284_bases ATGACGTCATCTCCCGAACCATTGCTGCCTGCGCGCATGCCGTTGATGCGCCCCCGGCAGGGCCGTTGGCTCACCGGTGT GTGCAAGGGCATCGCCCTGCACTTGGGCATCGGCGTGGCATGGATTCGGATTGCGTTCATCGCACTGACCTTCCTCTACG GCGCAGGCATCATCGCTTATGTATTCCTGTGGGTGTTCATGCCCGCCGGAGACCCGGTGACGGCTGCAGCTCGCACAGTG CCCGTTGATCAGGCGCCGCTTGCGCGAGGCAATCAGTCACTTGCCGCCCATGACGACGAATCGGCTGCCGCACCGGAATC ATTGTCCGAGGCCATCCAACGTGCTCCGAAACCGGCCGTCGTGGCATTGGCCGGTTTCGCGTTGATGGCCACCGGACTGC TGCTCACCAGCACCGGTGCGGATGTCCAGATTGTGCTTCCGCTGCTGGTAGGGTTGGGCGGCATCGCACTGGCATGGATG AATCTTAGTCCGCGAGGCACGCAGCTGTTGTCTATGTTGGGCGGCATCGCACTGATTTTCATGGGATGGGCATTGTATGT GCATAATGTCAGCATTCCTGGGTGGGGCGCCTCTCCTCGACGCATTGTTGCCAGCGGATTCATGATGATCGTCGGTATCG TGGTGGCAGTGATGCCGTGGGCGAACGCGATGCTGCAACGACTCACCCACGAGCAGGCATTGAAGGAGCGCGAAGAGGAG CGCGCGGACATGACCGCCCATCTGCATGATGGCGTGCTGCAAACGTTGGCGCTGATTCAGCTGCACTCCGAGGAATCGAC CACCGTATTCGCCCTGGCGCGTAGCCAAGAGCGCGAGCTGCGCGAATGGCTGTATCAGGAACGTTCCACATCGGATCGTT CGGTGGGAGCCGGATTGAAGCAGATCGCCGCCGAAGTGGAGGACGAGCACGGCAAGCCGATTGAGGTGGTCACCGTGGGC GACGCGCGGCCGAGCGCCCAGACCGATGCGCTGCTGGACGCCACCCGTCAGGCGTTGGTCAATGCGGTCACGCATGGCGG CGAGCCGGTGTCTTTGTATTGCGAGGCCAGCGACACGATGGTTGAAGTGTTCGTGCGCGACCATGGCGAAGGCTTCGATA TGGACGCCATTCCGCCCGACCGGCTGGGCATCCGCGAATCGATTATCGGCCGCATCAAACGGCGCGGCGGTACAGTGGAG ATAGTGTCCAGAGCCGGCTGGGGCACCGAGGTCAGAATGCATATGCCGATCGCGCTGAAAGCGGCGCAGGGAGAACATCG ATGA
Upstream 100 bases:
>100_bases CGCCCGACCACTGCCACAACGCTCGGGGAACACCCTGATTGTTCCCTGAACACCGGGTAAAACCCCGGTCGCAACGCCCT GAGCGCGGCACAATAGGAGT
Downstream 100 bases:
>100_bases GCGAGAACGAGACAGCCAAGATTCGTGTGGCCGTGGTCGATGACCATGAGATGTTCCGTGCGGGCGTAATCGCCACATTG CGCGATTCCTTCGATATCGT
Product: signal transduction histidine kinase
Products: NA
Alternate protein names: Two-Component System Sensor Kinase; Histidine Kinase Sensor Of Two Component System; Signal Transduction Histidine Kinase-Like Protein; ATPase Domain-Containing Protein; Sensor Histidine Kinase; Pspc Family Two Component System Sensor Kinase; Two Component System Sensor Kinase; Sensor Kinase; Two Component Sensor Kinase; Two-Component System Sensor Kinase Protein; Two-Component Signal Transduction Protein; Histidine Kinase Sensor; Two-Component Histidine Kinase; ATPase; PspC Domain-Containing Protein
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTSSPEPLLPARMPLMRPRQGRWLTGVCKGIALHLGIGVAWIRIAFIALTFLYGAGIIAYVFLWVFMPAGDPVTAAARTV PVDQAPLARGNQSLAAHDDESAAAPESLSEAIQRAPKPAVVALAGFALMATGLLLTSTGADVQIVLPLLVGLGGIALAWM NLSPRGTQLLSMLGGIALIFMGWALYVHNVSIPGWGASPRRIVASGFMMIVGIVVAVMPWANAMLQRLTHEQALKEREEE RADMTAHLHDGVLQTLALIQLHSEESTTVFALARSQERELREWLYQERSTSDRSVGAGLKQIAAEVEDEHGKPIEVVTVG DARPSAQTDALLDATRQALVNAVTHGGEPVSLYCEASDTMVEVFVRDHGEGFDMDAIPPDRLGIRESIIGRIKRRGGTVE IVSRAGWGTEVRMHMPIALKAAQGEHR
Sequences:
>Translated_427_residues MTSSPEPLLPARMPLMRPRQGRWLTGVCKGIALHLGIGVAWIRIAFIALTFLYGAGIIAYVFLWVFMPAGDPVTAAARTV PVDQAPLARGNQSLAAHDDESAAAPESLSEAIQRAPKPAVVALAGFALMATGLLLTSTGADVQIVLPLLVGLGGIALAWM NLSPRGTQLLSMLGGIALIFMGWALYVHNVSIPGWGASPRRIVASGFMMIVGIVVAVMPWANAMLQRLTHEQALKEREEE RADMTAHLHDGVLQTLALIQLHSEESTTVFALARSQERELREWLYQERSTSDRSVGAGLKQIAAEVEDEHGKPIEVVTVG DARPSAQTDALLDATRQALVNAVTHGGEPVSLYCEASDTMVEVFVRDHGEGFDMDAIPPDRLGIRESIIGRIKRRGGTVE IVSRAGWGTEVRMHMPIALKAAQGEHR >Mature_426_residues TSSPEPLLPARMPLMRPRQGRWLTGVCKGIALHLGIGVAWIRIAFIALTFLYGAGIIAYVFLWVFMPAGDPVTAAARTVP VDQAPLARGNQSLAAHDDESAAAPESLSEAIQRAPKPAVVALAGFALMATGLLLTSTGADVQIVLPLLVGLGGIALAWMN LSPRGTQLLSMLGGIALIFMGWALYVHNVSIPGWGASPRRIVASGFMMIVGIVVAVMPWANAMLQRLTHEQALKEREEER ADMTAHLHDGVLQTLALIQLHSEESTTVFALARSQERELREWLYQERSTSDRSVGAGLKQIAAEVEDEHGKPIEVVTVGD ARPSAQTDALLDATRQALVNAVTHGGEPVSLYCEASDTMVEVFVRDHGEGFDMDAIPPDRLGIRESIIGRIKRRGGTVEI VSRAGWGTEVRMHMPIALKAAQGEHR
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45994; Mature: 45863
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSPEPLLPARMPLMRPRQGRWLTGVCKGIALHLGIGVAWIRIAFIALTFLYGAGIIAY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLWVFMPAGDPVTAAARTVPVDQAPLARGNQSLAAHDDESAAAPESLSEAIQRAPKPAV HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH VALAGFALMATGLLLTSTGADVQIVLPLLVGLGGIALAWMNLSPRGTQLLSMLGGIALIF HHHHHHHHHHHHHHEECCCCCCEEHHHHHHCCCHHHHEEECCCCCHHHHHHHHHHHHHHH MGWALYVHNVSIPGWGASPRRIVASGFMMIVGIVVAVMPWANAMLQRLTHEQALKEREEE HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMTAHLHDGVLQTLALIQLHSEESTTVFALARSQERELREWLYQERSTSDRSVGAGLK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHH QIAAEVEDEHGKPIEVVTVGDARPSAQTDALLDATRQALVNAVTHGGEPVSLYCEASDTM HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCE VEVFVRDHGEGFDMDAIPPDRLGIRESIIGRIKRRGGTVEIVSRAGWGTEVRMHMPIALK EEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEE AAQGEHR CCCCCCC >Mature Secondary Structure TSSPEPLLPARMPLMRPRQGRWLTGVCKGIALHLGIGVAWIRIAFIALTFLYGAGIIAY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLWVFMPAGDPVTAAARTVPVDQAPLARGNQSLAAHDDESAAAPESLSEAIQRAPKPAV HHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH VALAGFALMATGLLLTSTGADVQIVLPLLVGLGGIALAWMNLSPRGTQLLSMLGGIALIF HHHHHHHHHHHHHHEECCCCCCEEHHHHHHCCCHHHHEEECCCCCHHHHHHHHHHHHHHH MGWALYVHNVSIPGWGASPRRIVASGFMMIVGIVVAVMPWANAMLQRLTHEQALKEREEE HHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RADMTAHLHDGVLQTLALIQLHSEESTTVFALARSQERELREWLYQERSTSDRSVGAGLK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHH QIAAEVEDEHGKPIEVVTVGDARPSAQTDALLDATRQALVNAVTHGGEPVSLYCEASDTM HHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCE VEVFVRDHGEGFDMDAIPPDRLGIRESIIGRIKRRGGTVEIVSRAGWGTEVRMHMPIALK EEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEE AAQGEHR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA