| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213693018
Identifier: 213693018
GI number: 213693018
Start: 2397167
End: 2397799
Strand: Direct
Name: 213693018
Synonym: Blon_2165
Alternate gene names: NA
Gene position: 2397167-2397799 (Clockwise)
Preceding gene: 213693017
Following gene: 213693022
Centisome position: 84.62
GC content: 59.4
Gene sequence:
>633_bases ATGACCAACGAACTGACTGATGATGAACTGCGCGAGGCTATTGTGCTCCATGAATGGGATCAGTTCCAGCGCACCAACAA TGAGGGTGGACGCGCGGCATGCCAAGGTAACTGGCCGGTGTTCCACCAGATGCGGTTGGCCCAGTTCCTCACATGGGAAC GGCCATTACTCACCAGCTATGCCGCTGATCTTGACGCGGCCGACCACGTGGGCCGCAACCTCGTGACCGAAAAATACGGC CGCATGATGGCCTCCACCGCGCCGGAAGATTTCACGAAGAACATAGAGCCGTATATTCCGCGTCTCTCTGAAGAGCGCGT GGCCCGTCAGGAACAGGTCATCGCCCAGCAGGTCGCCTGGGCCAAGGATTTCCGCGAGCGCTACCCCAAGCTCGGCGAGG CGATGCGCGTACTCACCACCACCGACGACACACCATCTGCCACCTCATTCGAAACCTATCTGCGCGGCGAGCTTGGTACG TATTCCGACCAGACCTTCGAACGTTACGAAGCGATGATTGGCGAGCGGGCCGCAGCCAGCCTGCAACGCAATATCACTGA GGAAACCTTGTTGCACACGGTCCAGCTCGGCGGTTTCGACACCTTGGAGGAGGCCGAAGCCTCCCAAGCGTAA
Upstream 100 bases:
>100_bases TCTGATGATCCGGTGCTTAAAAGTTTGTAGATTCAAGCTCCCTCTGTCACGGCTTCGCCGTGCCATCTCCCTCATCAGAG GATTAGTGAAAGGAACGTCG
Downstream 100 bases:
>100_bases TACTCAGCCATTCACTGTGTACCGGACACCCCGACTGATGTACGCCGGCCGGCCACACCCAGGCCAACGCAATCTGCCGA TCGCCCCACACCCAGACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTNELTDDELREAIVLHEWDQFQRTNNEGGRAACQGNWPVFHQMRLAQFLTWERPLLTSYAADLDAADHVGRNLVTEKYG RMMASTAPEDFTKNIEPYIPRLSEERVARQEQVIAQQVAWAKDFRERYPKLGEAMRVLTTTDDTPSATSFETYLRGELGT YSDQTFERYEAMIGERAAASLQRNITEETLLHTVQLGGFDTLEEAEASQA
Sequences:
>Translated_210_residues MTNELTDDELREAIVLHEWDQFQRTNNEGGRAACQGNWPVFHQMRLAQFLTWERPLLTSYAADLDAADHVGRNLVTEKYG RMMASTAPEDFTKNIEPYIPRLSEERVARQEQVIAQQVAWAKDFRERYPKLGEAMRVLTTTDDTPSATSFETYLRGELGT YSDQTFERYEAMIGERAAASLQRNITEETLLHTVQLGGFDTLEEAEASQA >Mature_209_residues TNELTDDELREAIVLHEWDQFQRTNNEGGRAACQGNWPVFHQMRLAQFLTWERPLLTSYAADLDAADHVGRNLVTEKYGR MMASTAPEDFTKNIEPYIPRLSEERVARQEQVIAQQVAWAKDFRERYPKLGEAMRVLTTTDDTPSATSFETYLRGELGTY SDQTFERYEAMIGERAAASLQRNITEETLLHTVQLGGFDTLEEAEASQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24016; Mature: 23885
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNELTDDELREAIVLHEWDQFQRTNNEGGRAACQGNWPVFHQMRLAQFLTWERPLLTSY CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHH AADLDAADHVGRNLVTEKYGRMMASTAPEDFTKNIEPYIPRLSEERVARQEQVIAQQVAW HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHH AKDFRERYPKLGEAMRVLTTTDDTPSATSFETYLRGELGTYSDQTFERYEAMIGERAAAS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LQRNITEETLLHTVQLGGFDTLEEAEASQA HHHHHHHHHHHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure TNELTDDELREAIVLHEWDQFQRTNNEGGRAACQGNWPVFHQMRLAQFLTWERPLLTSY CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCHHHHHH AADLDAADHVGRNLVTEKYGRMMASTAPEDFTKNIEPYIPRLSEERVARQEQVIAQQVAW HHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHH AKDFRERYPKLGEAMRVLTTTDDTPSATSFETYLRGELGTYSDQTFERYEAMIGERAAAS HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LQRNITEETLLHTVQLGGFDTLEEAEASQA HHHHHHHHHHHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA