| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yclI [H]
Identifier: 213692990
GI number: 213692990
Start: 2363017
End: 2364384
Strand: Direct
Name: yclI [H]
Synonym: Blon_2137
Alternate gene names: 213692990
Gene position: 2363017-2364384 (Clockwise)
Preceding gene: 213692989
Following gene: 213692991
Centisome position: 83.42
GC content: 61.55
Gene sequence:
>1368_bases ATGACGTTCGTTGCACGGTCGGTGCGCTATGTGCTCAGAAAACGAGTGCGAACCATAGTGCTCCTTATAGTATTGACCAT CATAACGGCGAGCATGCTATCCACGATCGCGGTTTCTCGGGCAGCTCAACAGGCCGCCGGACGAATCGAGAAGGAAGCGG TCGGCGGGTTCGTGCTGGCCAGCAACCTGCAGGGCAGCATGCTCACGCCTCGCGGAGGTGGCATGGTGCGTCCCGCCGAC GTGCGCAGGATCGCCCAACTGCCCGGGGTCGATTCGTATATGGTCCGTCAGAACGCCACCGCCGATCTCGTGGGGGCGAA TGTGGCGAAGGTCCCCGGCGGCGATGATTACGATGCGACCAAGGAGCAGCAGTTCGGCAACGCCGCCAACGTCATAGGCA CGAATGATTCGTCGAAACTCAACGTGTTCACGTCGCGCACGCTCGGCATGGCCGAAGGACGGCATCTGAAGGCCTCCGAC AAGTACACGTCGATGATCCATGAGGATCTCGCCAAAGCCAACGGGCTCAAAGTCGGAGACACGCTCACGCTCAAGGCCAA CGCCTACGACGCCGACAACGAATCACATTCGACGGCGACCGTCAAGACCACCATCGTGGGCATATTCAAGGGCGACAGCG CCAGAAAGGTATCCAGCCGAGCGGAACTCACCGCCAACACCATCTACACCGATCTGGATACCACACGCGATCTGTACCAG TACAAGGACGGCAAGGAAATATACCAGGACGCCACCTTCGTGCTGTCCAAGGGCGTTGACGTGGAGAAGACCATGGACGC CGCGAAGAAACTCCCGGTGGATTGGAACAACTATCAGATCACGCGCAACGACCAGTATTCGTCGAGCATGCTGCATGCCG CCCGCGGCGTGCGCTCCATGATGCGCGGCGCCCTGATCGGCGTTACCGTCTCGGCCGTGCTCGTGCTCAGTCTCATGCTG CTGCTGTGGATGAACGACCGACGTCAGGAGATGGGCATACTGGTGTCCCTTGGCGTCGGCAAGCCCTCCCTGGTCGCCCA ATACCTCGCCGAGATGATGCTGATCGGTCTGCCGTCCCTCGTCCTCGGCTGGCTGTGCGCGCAGGGAATGGCCCAATGGC TCGGCACCACGGCGCTCCATTCCGTGAACGCCTCCGCTGCGAAGGAGCTGAGCAGCATGGGGCAGGTCGGCGGCGATCTT GAATCCAGCATGTCGGTGCGCACCCTGGATTCGCTCACGGTGTCGGTCGATGGGACCGCCATGCTGTACGTGGCGCTCGG CCTGCTGGCGGTGATGCTGGTGTGCGTCGCGGTGGCGTGCATGCCGATGCTGCGTAAATCGCCGCGAGACCTGTCGGAGA TTCGATGA
Upstream 100 bases:
>100_bases TATCTTGAGGTGCATCATGTATTGTCGCGGCTAACTAACCGGCGAAACGCGGCATGTTTCGCATTTTGGGCGAAAAGCCC AAGGCCCACAGGAGGTATTG
Downstream 100 bases:
>100_bases TGAGCATGAATGTGTGGAAGCGTGCCACGTTGGCGATCGTACGCAAGCCGGTACGCAGCGGCATCATCGGTCTGCTGATG CTGATGGTCTTCACGAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MTFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLASNLQGSMLTPRGGGMVRPAD VRRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDATKEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASD KYTSMIHEDLAKANGLKVGDTLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQ YKDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSMMRGALIGVTVSAVLVLSLML LLWMNDRRQEMGILVSLGVGKPSLVAQYLAEMMLIGLPSLVLGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDL ESSMSVRTLDSLTVSVDGTAMLYVALGLLAVMLVCVAVACMPMLRKSPRDLSEIR
Sequences:
>Translated_455_residues MTFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLASNLQGSMLTPRGGGMVRPAD VRRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDATKEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASD KYTSMIHEDLAKANGLKVGDTLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQ YKDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSMMRGALIGVTVSAVLVLSLML LLWMNDRRQEMGILVSLGVGKPSLVAQYLAEMMLIGLPSLVLGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDL ESSMSVRTLDSLTVSVDGTAMLYVALGLLAVMLVCVAVACMPMLRKSPRDLSEIR >Mature_454_residues TFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLASNLQGSMLTPRGGGMVRPADV RRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDATKEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASDK YTSMIHEDLAKANGLKVGDTLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQY KDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSMMRGALIGVTVSAVLVLSLMLL LWMNDRRQEMGILVSLGVGKPSLVAQYLAEMMLIGLPSLVLGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDLE SSMSVRTLDSLTVSVDGTAMLYVALGLLAVMLVCVAVACMPMLRKSPRDLSEIR
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-4 integral membrane protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003838 [H]
Pfam domain/function: PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 48945; Mature: 48814
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE SNLQGSMLTPRGGGMVRPADVRRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDAT CCCCCCEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCEEECCCCCCCCCC KEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASDKYTSMIHEDLAKANGLKVGD HHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC TLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQ EEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHH YKDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSM CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH MRGALIGVTVSAVLVLSLMLLLWMNDRRQEMGILVSLGVGKPSLVAQYLAEMMLIGLPSL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHCCHHH VLGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDLESSMSVRTLDSLTVSVDGTA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHEEHHCEEEEECCHH MLYVALGLLAVMLVCVAVACMPMLRKSPRDLSEIR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure TFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE SNLQGSMLTPRGGGMVRPADVRRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDAT CCCCCCEECCCCCCCCCHHHHHHHHHCCCCCHHHHHCCCCHHHHCCCEEECCCCCCCCCC KEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASDKYTSMIHEDLAKANGLKVGD HHHHCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC TLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQ EEEEEECCCCCCCCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHEEECCHHHHHHHH YKDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSM CCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHH MRGALIGVTVSAVLVLSLMLLLWMNDRRQEMGILVSLGVGKPSLVAQYLAEMMLIGLPSL HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHCCHHH VLGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDLESSMSVRTLDSLTVSVDGTA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHCCHHEEHHCEEEEECCHH MLYVALGLLAVMLVCVAVACMPMLRKSPRDLSEIR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]