| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692646
Identifier: 213692646
GI number: 213692646
Start: 1955551
End: 1956120
Strand: Reverse
Name: 213692646
Synonym: Blon_1779
Alternate gene names: NA
Gene position: 1956120-1955551 (Counterclockwise)
Preceding gene: 213692647
Following gene: 213692645
Centisome position: 69.05
GC content: 58.25
Gene sequence:
>570_bases ATGGCTTCACGCTGGACCGATGTCGAACGAGTCGAACAAGGCGCCCTGCCCACCATGCTTGCCCAAGCCGTCATTGCGGG CACTGCGCTCACCGTTGGTGCCATCGCCTGCTCGGGATTCTATCTGTCCATGATCGGCAATGTGGCCGCGCTCCTGCCAT GGGCGACTATCGTGATACTGATTGCCGTGGCATTCACCTACATCGTCGGCTTCGCCCTGTTGTGGTGTGCCGAAGCCTTG ACCCTGCGTGCCAACGACAAACTCAAGCCATGGCTGTACGGCGTCGTCGGATTAATCGGCTACGGCGTGTGGGGCATGTT CGTGATGAGCACGATGATGAACACGTTGAACCAGCCGCTGAACGGCGTGGTGTTGTCGAACAGCGATGTGATGGCCCTGA CCGTCAACTACGCGGTGTTCGGCTTCATCGCCTTCCTGTTGGCACAGGCGTACGCGCCCAAAATCGCCACCAAGAAGGGA CTGACCATCGGGCTGATGGTGGTGCAGATCGTATTGGCCATCATCGGCATCATCGTACTGGTTATGATGTTCTCCGCACT GTCTCACTGA
Upstream 100 bases:
>100_bases GGCTCGCAGCTTACTATGTGGGGAGCTTATAAGGCCGAAACAAAAGGCCGTTAGGCTATGTGGCGTTGTGACGTTGTACC TGATGAAACGAGGAATCCAC
Downstream 100 bases:
>100_bases CTGACTTATCGATCACCGGCACGACGCGCGCGGCCATCACCGCACAAGGCGAAAGCGATTCCGGGCGCTAGGCTGGAATA CGATATCGTGATGGCGTGAC
Product: Cd efflux system component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MASRWTDVERVEQGALPTMLAQAVIAGTALTVGAIACSGFYLSMIGNVAALLPWATIVILIAVAFTYIVGFALLWCAEAL TLRANDKLKPWLYGVVGLIGYGVWGMFVMSTMMNTLNQPLNGVVLSNSDVMALTVNYAVFGFIAFLLAQAYAPKIATKKG LTIGLMVVQIVLAIIGIIVLVMMFSALSH
Sequences:
>Translated_189_residues MASRWTDVERVEQGALPTMLAQAVIAGTALTVGAIACSGFYLSMIGNVAALLPWATIVILIAVAFTYIVGFALLWCAEAL TLRANDKLKPWLYGVVGLIGYGVWGMFVMSTMMNTLNQPLNGVVLSNSDVMALTVNYAVFGFIAFLLAQAYAPKIATKKG LTIGLMVVQIVLAIIGIIVLVMMFSALSH >Mature_188_residues ASRWTDVERVEQGALPTMLAQAVIAGTALTVGAIACSGFYLSMIGNVAALLPWATIVILIAVAFTYIVGFALLWCAEALT LRANDKLKPWLYGVVGLIGYGVWGMFVMSTMMNTLNQPLNGVVLSNSDVMALTVNYAVFGFIAFLLAQAYAPKIATKKGL TIGLMVVQIVLAIIGIIVLVMMFSALSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20151; Mature: 20019
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRWTDVERVEQGALPTMLAQAVIAGTALTVGAIACSGFYLSMIGNVAALLPWATIVIL CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVAFTYIVGFALLWCAEALTLRANDKLKPWLYGVVGLIGYGVWGMFVMSTMMNTLNQPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGVVLSNSDVMALTVNYAVFGFIAFLLAQAYAPKIATKKGLTIGLMVVQIVLAIIGIIVL CCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH VMMFSALSH HHHHHHHCC >Mature Secondary Structure ASRWTDVERVEQGALPTMLAQAVIAGTALTVGAIACSGFYLSMIGNVAALLPWATIVIL CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAVAFTYIVGFALLWCAEALTLRANDKLKPWLYGVVGLIGYGVWGMFVMSTMMNTLNQPL HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGVVLSNSDVMALTVNYAVFGFIAFLLAQAYAPKIATKKGLTIGLMVVQIVLAIIGIIVL CCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHH VMMFSALSH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA