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The map label for this gene is ygdH [C]

Identifier: 213692572

GI number: 213692572

Start: 1864766

End: 1865605

Strand: Reverse

Name: ygdH [C]

Synonym: Blon_1704

Alternate gene names: 213692572

Gene position: 1865605-1864766 (Counterclockwise)

Preceding gene: 213692573

Following gene: 213692564

Centisome position: 65.86

GC content: 62.02

Gene sequence:

>840_bases
ATGGAACCACTGGAAGCCACAGCTGCGAATGATACGGCAACGTTGGAGGCTGAGACGGCAACTGAGGCTGCGGCCACACC
GGTGAACCCGGTCGACTTGGAGGAGGCTTCGCCGCTGGGCGACACCTATCATCGCGGCCCGGTGATTCTACGCGGCCAGA
TGATTCCCTCGGACAACACCACCGCCAACCTGCTGAAACCCGACCGGGACACCGACTGGCTGCACATGGACCCATGGCGT
GTGCTGCGCATCCAATCGGAATTCGTGGACGGCTTCGGGGCGCTCGCCGAGCTCGGACCTGCAGTCTCAATTTTCGGCTC
CGCACGCACCCAGCGCACCGAATCGATCTACAAGGCGGCACGGCGCATGGGTAGCCAGATAGCCAAGCGCAACATCGCCG
TCATCACCGGCGGTGGTCCCGGCATCATGGAAGCCGCGAATAGGGGAGCGGCACTGGCCGGCGGCAAATCCGTGGGACTC
GGCATCGAATTGCCGCACGAGCAGGGGGTGAACCAGTGGGTGAACCTCGGCATGAGCTTCCGGTACTTCTTTGTGCGGAA
GACCATGTTCGTCAAGTATTCCTCGGGCGTGATTGTGTGCCCGGGCGGCTTCGGCACACTGGATGAGATGTTCGAGCTGC
TGACCTTGGTCCAGACCCACAAGGTGGCGAATATTCCGGTGGTGCTCTACGGCAAGGAATACTGGCAGGGGCTCTTTGAC
TGGCTCAACGGTCCGGTGGCCGAGCACGGCATGATCTCGACGATCGACCCGAAACTGGTCACCGTAACCGACGACGCCGA
CGAAGCCGTGGACGTGGCCGTCAGCGCAATCGTGAGATAA

Upstream 100 bases:

>100_bases
GGCAAAGAAGCAGAAGAAATCCAAGAAGAACGGCGGCAAAAAGGCCGTTGAAGCAAAGAATCCAGCCGAGGCCGCGTCCC
AGCCCGCAGTCGTGGACGAT

Downstream 100 bases:

>100_bases
GCGAGATAGAGTGGCTCCCCTCTCCGAGGGGAGCCAAGGACAGAGTTACTTTTTGTAGGCGATGAGCAGGCCGGTGCCGT
CAGGGGTGAGCGTGGACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MEPLEATAANDTATLEAETATEAAATPVNPVDLEEASPLGDTYHRGPVILRGQMIPSDNTTANLLKPDRDTDWLHMDPWR
VLRIQSEFVDGFGALAELGPAVSIFGSARTQRTESIYKAARRMGSQIAKRNIAVITGGGPGIMEAANRGAALAGGKSVGL
GIELPHEQGVNQWVNLGMSFRYFFVRKTMFVKYSSGVIVCPGGFGTLDEMFELLTLVQTHKVANIPVVLYGKEYWQGLFD
WLNGPVAEHGMISTIDPKLVTVTDDADEAVDVAVSAIVR

Sequences:

>Translated_279_residues
MEPLEATAANDTATLEAETATEAAATPVNPVDLEEASPLGDTYHRGPVILRGQMIPSDNTTANLLKPDRDTDWLHMDPWR
VLRIQSEFVDGFGALAELGPAVSIFGSARTQRTESIYKAARRMGSQIAKRNIAVITGGGPGIMEAANRGAALAGGKSVGL
GIELPHEQGVNQWVNLGMSFRYFFVRKTMFVKYSSGVIVCPGGFGTLDEMFELLTLVQTHKVANIPVVLYGKEYWQGLFD
WLNGPVAEHGMISTIDPKLVTVTDDADEAVDVAVSAIVR
>Mature_279_residues
MEPLEATAANDTATLEAETATEAAATPVNPVDLEEASPLGDTYHRGPVILRGQMIPSDNTTANLLKPDRDTDWLHMDPWR
VLRIQSEFVDGFGALAELGPAVSIFGSARTQRTESIYKAARRMGSQIAKRNIAVITGGGPGIMEAANRGAALAGGKSVGL
GIELPHEQGVNQWVNLGMSFRYFFVRKTMFVKYSSGVIVCPGGFGTLDEMFELLTLVQTHKVANIPVVLYGKEYWQGLFD
WLNGPVAEHGMISTIDPKLVTVTDDADEAVDVAVSAIVR

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30104; Mature: 30104

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPLEATAANDTATLEAETATEAAATPVNPVDLEEASPLGDTYHRGPVILRGQMIPSDNT
CCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
TANLLKPDRDTDWLHMDPWRVLRIQSEFVDGFGALAELGPAVSIFGSARTQRTESIYKAA
EEECCCCCCCCCCEEECCHHEEEEHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHH
RRMGSQIAKRNIAVITGGGPGIMEAANRGAALAGGKSVGLGIELPHEQGVNQWVNLGMSF
HHHHHHHHHCCEEEEECCCCHHHHHCCCCCEEECCCEECCEEECCHHHCHHHHHHCCCHH
RYFFVRKTMFVKYSSGVIVCPGGFGTLDEMFELLTLVQTHKVANIPVVLYGKEYWQGLFD
HHHEEEHEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
WLNGPVAEHGMISTIDPKLVTVTDDADEAVDVAVSAIVR
HHCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MEPLEATAANDTATLEAETATEAAATPVNPVDLEEASPLGDTYHRGPVILRGQMIPSDNT
CCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
TANLLKPDRDTDWLHMDPWRVLRIQSEFVDGFGALAELGPAVSIFGSARTQRTESIYKAA
EEECCCCCCCCCCEEECCHHEEEEHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHH
RRMGSQIAKRNIAVITGGGPGIMEAANRGAALAGGKSVGLGIELPHEQGVNQWVNLGMSF
HHHHHHHHHCCEEEEECCCCHHHHHCCCCCEEECCCEECCEEECCHHHCHHHHHHCCCHH
RYFFVRKTMFVKYSSGVIVCPGGFGTLDEMFELLTLVQTHKVANIPVVLYGKEYWQGLFD
HHHEEEHEEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
WLNGPVAEHGMISTIDPKLVTVTDDADEAVDVAVSAIVR
HHCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA