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The map label for this gene is yxjL [H]

Identifier: 213692291

GI number: 213692291

Start: 1577091

End: 1577759

Strand: Reverse

Name: yxjL [H]

Synonym: Blon_1414

Alternate gene names: 213692291

Gene position: 1577759-1577091 (Counterclockwise)

Preceding gene: 213692292

Following gene: 213692289

Centisome position: 55.7

GC content: 58.3

Gene sequence:

>669_bases
ATGATTCGTATAATGCTCGTAGACGACCAGCGTTTCGCGCGACTTGGCTTCCAACTCATGCTTGACGATGCTTCCGACAT
CGTCGTCACTGCCCAGTCCGCTGACGGCCGATCCGCCATCGAGACGCTCGAACAGCTCGCCGTTCAGCATCGTCCATTGC
CGAATGTAATCCTCATGGATGTGCGGATGCCCGGTATGGACGGCATCGAAGCCACTCGCCGCATCACCAGACGCTGGCCC
ACCATCAGCATTCTCATCCTTACCACGTACGACGAGGACGATTACGCCTTTGGCGGTCTCGACGCCGGAGCCAGCGGCTT
CCTGCTCAAGGACGTCACCAAGCACAACCTCATCGACGCGGTTCACGCCATCGCCAACGGTGACGCAATACTCACCCCAC
GAATCACCAGACAAGTGCTTGAACGAGGCGTTCCGCATCCCACCAGCAGCCAGCGCCAGCAAGAAATGCGCAAAGCTTTC
GACGCACTCACCCCTCGCCAGCGTGAAATCTGCGCACTCATCTCCGAAGGGCTCATCAACGAGGAAATCGCCAATCAACT
CACCGTCGAACCTGCCTCCGTCAAACGTGCCGTGACCCGTATCCTCGCAACTTTGGGCCTGCGCAATCGCACTCAAATCG
CCATCGGCTGGTTCAAAGCAGGCATGTAG

Upstream 100 bases:

>100_bases
CGGCAAGCGGCATCTTCGAATACGGTCCAAACGAAGACGGCGAATGGGTCGTCGAGGCGACCATCCCGTCCAACGGAGTG
AACGAAAAGGACCACACCGC

Downstream 100 bases:

>100_bases
ACCTGCTATTTGCTCAGCAGCTCATTCAAGCGGATTGTTGTTACGAATGCGACTACCGCACGCCCCCCAAGACGGATTCC
ATGTTCGACACCCCATTCGG

Product: two component transcriptional regulator, LuxR family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MIRIMLVDDQRFARLGFQLMLDDASDIVVTAQSADGRSAIETLEQLAVQHRPLPNVILMDVRMPGMDGIEATRRITRRWP
TISILILTTYDEDDYAFGGLDAGASGFLLKDVTKHNLIDAVHAIANGDAILTPRITRQVLERGVPHPTSSQRQQEMRKAF
DALTPRQREICALISEGLINEEIANQLTVEPASVKRAVTRILATLGLRNRTQIAIGWFKAGM

Sequences:

>Translated_222_residues
MIRIMLVDDQRFARLGFQLMLDDASDIVVTAQSADGRSAIETLEQLAVQHRPLPNVILMDVRMPGMDGIEATRRITRRWP
TISILILTTYDEDDYAFGGLDAGASGFLLKDVTKHNLIDAVHAIANGDAILTPRITRQVLERGVPHPTSSQRQQEMRKAF
DALTPRQREICALISEGLINEEIANQLTVEPASVKRAVTRILATLGLRNRTQIAIGWFKAGM
>Mature_222_residues
MIRIMLVDDQRFARLGFQLMLDDASDIVVTAQSADGRSAIETLEQLAVQHRPLPNVILMDVRMPGMDGIEATRRITRRWP
TISILILTTYDEDDYAFGGLDAGASGFLLKDVTKHNLIDAVHAIANGDAILTPRITRQVLERGVPHPTSSQRQQEMRKAF
DALTPRQREICALISEGLINEEIANQLTVEPASVKRAVTRILATLGLRNRTQIAIGWFKAGM

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788222, Length=214, Percent_Identity=28.9719626168224, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1788521, Length=224, Percent_Identity=31.25, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1790102, Length=214, Percent_Identity=30.8411214953271, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787473, Length=217, Percent_Identity=29.9539170506912, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786747, Length=206, Percent_Identity=26.2135922330097, Blast_Score=74, Evalue=5e-15,
Organism=Escherichia coli, GI1788712, Length=205, Percent_Identity=25.3658536585366, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788546, Length=211, Percent_Identity=24.1706161137441, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24683; Mature: 24683

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRIMLVDDQRFARLGFQLMLDDASDIVVTAQSADGRSAIETLEQLAVQHRPLPNVILMD
CEEEEEECCHHHHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE
VRMPGMDGIEATRRITRRWPTISILILTTYDEDDYAFGGLDAGASGFLLKDVTKHNLIDA
EECCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH
VHAIANGDAILTPRITRQVLERGVPHPTSSQRQQEMRKAFDALTPRQREICALISEGLIN
HHHHHCCCEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
EEIANQLTVEPASVKRAVTRILATLGLRNRTQIAIGWFKAGM
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MIRIMLVDDQRFARLGFQLMLDDASDIVVTAQSADGRSAIETLEQLAVQHRPLPNVILMD
CEEEEEECCHHHHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEE
VRMPGMDGIEATRRITRRWPTISILILTTYDEDDYAFGGLDAGASGFLLKDVTKHNLIDA
EECCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHH
VHAIANGDAILTPRITRQVLERGVPHPTSSQRQQEMRKAFDALTPRQREICALISEGLIN
HHHHHCCCEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH
EEIANQLTVEPASVKRAVTRILATLGLRNRTQIAIGWFKAGM
HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]