| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213692292
Identifier: 213692292
GI number: 213692292
Start: 1577756
End: 1579024
Strand: Reverse
Name: 213692292
Synonym: Blon_1415
Alternate gene names: NA
Gene position: 1579024-1577756 (Counterclockwise)
Preceding gene: 213692293
Following gene: 213692291
Centisome position: 55.74
GC content: 60.44
Gene sequence:
>1269_bases ATGCTGACATGCACGCAACATCATACAAAAAGAGCCACAATGGGAGCCATGAAACCGCAATCCGCGCAGGCCAATAAGGT CACGGTCCTGGCCGTGCCACTGGTCATCGCCGTGGTCGAATGTGCAGCGATGCTGTGGGAGCATGCGATCGGAGCGCCGG CCGACACCATGTATACGTTTGCCAAAGATCCGCTGGGATTGGCTCTGCTGCTGGCGATGACCATAGCCAGCAGTGCGATA CTGCTTGTCCGTTACTGGCTGCCAGCCGTTGCCTTGGCGCTTGAAGCGGTATTGTTAATAGTTGCCTCGTACTGGCGGTT GGACTCAATCGTGATGATTCAGACGCTCGTCGCCTGCTATGCGTTCGCCCGGACAGCGAGGGGGCGCGGGCTGTGCGTTG GAGGCATCGGCATGATGCTGTCGATGACCGCGTCGGCCATCATGGTGCATCCGGACGTTCTCGCGACCGAATGGGTGAGT CGAGTGGTAACGTTGGCAGCCGTGGGAGGCGGCGCGCTTGCAGTACGTGGCAGGCAACAGGCCAAGGAAGCCGAACACAA AGCTGCCGAGGAATGCCGGCGGGCAGCCGAGCTGGCCTTCCAACGCGATGCCGCAATACGCCGTTCGCGCATAGCCGGTC AACTGCACGACAGTGTGGGCCAGGATCTGACCGTAATCATCGCACTGTCTGAGGGTCTGGCCGGCAAAACCGATGACCCA CGCGTGGAGGATGCGCTGCACGGCATCAACGAAATCGCACGAGAGAGTCTGGGCGACACGCGCAAAGCCGTCCGCGCACT GACCGAGTTCGATGGAGCGGCGAACGGTGACGATACGCACACCCAAGAATCAGACCAGCATTCATGGGATGACATTCGGC CGATTCTCGCGCACGCACGCCGGCTGGGCATCGTCACGGTGTTCACCGAGACTGGTACGCGCGCCGATGACGAAGCTCAG GCTGATTTGTGTTTCGATGTGACTCGCGAAGCCATCACCAACGCCATACGTCACGGACAGAACGTGGTGCATATCAGCAT CGCCTGGAACCACAGCGAGAACGGCACCGTCGCCGTGATTATCCGCAATGACGGCAGTCCCGCGCGCAAGGACGCGCGCA AGGATGACGGTACTGGGCTCGTCCGTCTATTCCACCGCGTCGAATCGGCAAGCGGCATCTTCGAATACGGTCCAAACGAA GACGGCGAATGGGTCGTCGAGGCGACCATCCCGTCCAACGGAGTGAACGAAAAGGACCACACCGCATGA
Upstream 100 bases:
>100_bases TAATCGGCATGGGCACGGCCTGCTGGCTGGCATTGTTCCTCATCCAGTTCACGCAGATTCGCCCCGCGCTACACCGCAGC GTGGCCGACACGATACGCAC
Downstream 100 bases:
>100_bases TTCGTATAATGCTCGTAGACGACCAGCGTTTCGCGCGACTTGGCTTCCAACTCATGCTTGACGATGCTTCCGACATCGTC GTCACTGCCCAGTCCGCTGA
Product: histidine kinase, dimerisation and phosphoacceptor region
Products: NA
Alternate protein names: Two-Component System Sensor Kinase; Histidine Kinase Dimerisation And Phosphoacceptor Region; Signal Transduction Histidine Kinase; Two-Component Sensor; Two-Component Sensor Kinase; Sensor Kinase; Histidine Kinase Dimerization And Phosphoacceptor Region
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLTCTQHHTKRATMGAMKPQSAQANKVTVLAVPLVIAVVECAAMLWEHAIGAPADTMYTFAKDPLGLALLLAMTIASSAI LLVRYWLPAVALALEAVLLIVASYWRLDSIVMIQTLVACYAFARTARGRGLCVGGIGMMLSMTASAIMVHPDVLATEWVS RVVTLAAVGGGALAVRGRQQAKEAEHKAAEECRRAAELAFQRDAAIRRSRIAGQLHDSVGQDLTVIIALSEGLAGKTDDP RVEDALHGINEIARESLGDTRKAVRALTEFDGAANGDDTHTQESDQHSWDDIRPILAHARRLGIVTVFTETGTRADDEAQ ADLCFDVTREAITNAIRHGQNVVHISIAWNHSENGTVAVIIRNDGSPARKDARKDDGTGLVRLFHRVESASGIFEYGPNE DGEWVVEATIPSNGVNEKDHTA
Sequences:
>Translated_422_residues MLTCTQHHTKRATMGAMKPQSAQANKVTVLAVPLVIAVVECAAMLWEHAIGAPADTMYTFAKDPLGLALLLAMTIASSAI LLVRYWLPAVALALEAVLLIVASYWRLDSIVMIQTLVACYAFARTARGRGLCVGGIGMMLSMTASAIMVHPDVLATEWVS RVVTLAAVGGGALAVRGRQQAKEAEHKAAEECRRAAELAFQRDAAIRRSRIAGQLHDSVGQDLTVIIALSEGLAGKTDDP RVEDALHGINEIARESLGDTRKAVRALTEFDGAANGDDTHTQESDQHSWDDIRPILAHARRLGIVTVFTETGTRADDEAQ ADLCFDVTREAITNAIRHGQNVVHISIAWNHSENGTVAVIIRNDGSPARKDARKDDGTGLVRLFHRVESASGIFEYGPNE DGEWVVEATIPSNGVNEKDHTA >Mature_422_residues MLTCTQHHTKRATMGAMKPQSAQANKVTVLAVPLVIAVVECAAMLWEHAIGAPADTMYTFAKDPLGLALLLAMTIASSAI LLVRYWLPAVALALEAVLLIVASYWRLDSIVMIQTLVACYAFARTARGRGLCVGGIGMMLSMTASAIMVHPDVLATEWVS RVVTLAAVGGGALAVRGRQQAKEAEHKAAEECRRAAELAFQRDAAIRRSRIAGQLHDSVGQDLTVIIALSEGLAGKTDDP RVEDALHGINEIARESLGDTRKAVRALTEFDGAANGDDTHTQESDQHSWDDIRPILAHARRLGIVTVFTETGTRADDEAQ ADLCFDVTREAITNAIRHGQNVVHISIAWNHSENGTVAVIIRNDGSPARKDARKDDGTGLVRLFHRVESASGIFEYGPNE DGEWVVEATIPSNGVNEKDHTA
Specific function: Unknown
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45430; Mature: 45430
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTCTQHHTKRATMGAMKPQSAQANKVTVLAVPLVIAVVECAAMLWEHAIGAPADTMYTF CCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AKDPLGLALLLAMTIASSAILLVRYWLPAVALALEAVLLIVASYWRLDSIVMIQTLVACY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARTARGRGLCVGGIGMMLSMTASAIMVHPDVLATEWVSRVVTLAAVGGGALAVRGRQQ HHHHHCCCCCEEEHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCEEEECCHHH AKEAEHKAAEECRRAAELAFQRDAAIRRSRIAGQLHDSVGQDLTVIIALSEGLAGKTDDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RVEDALHGINEIARESLGDTRKAVRALTEFDGAANGDDTHTQESDQHSWDDIRPILAHAR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RLGIVTVFTETGTRADDEAQADLCFDVTREAITNAIRHGQNVVHISIAWNHSENGTVAVI HCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEE IRNDGSPARKDARKDDGTGLVRLFHRVESASGIFEYGPNEDGEWVVEATIPSNGVNEKDH EECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCCCC TA CC >Mature Secondary Structure MLTCTQHHTKRATMGAMKPQSAQANKVTVLAVPLVIAVVECAAMLWEHAIGAPADTMYTF CCCCCCHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AKDPLGLALLLAMTIASSAILLVRYWLPAVALALEAVLLIVASYWRLDSIVMIQTLVACY HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFARTARGRGLCVGGIGMMLSMTASAIMVHPDVLATEWVSRVVTLAAVGGGALAVRGRQQ HHHHHCCCCCEEEHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCCCEEEECCHHH AKEAEHKAAEECRRAAELAFQRDAAIRRSRIAGQLHDSVGQDLTVIIALSEGLAGKTDDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC RVEDALHGINEIARESLGDTRKAVRALTEFDGAANGDDTHTQESDQHSWDDIRPILAHAR HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH RLGIVTVFTETGTRADDEAQADLCFDVTREAITNAIRHGQNVVHISIAWNHSENGTVAVI HCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEEE IRNDGSPARKDARKDDGTGLVRLFHRVESASGIFEYGPNEDGEWVVEATIPSNGVNEKDH EECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEECCCCCCCCCCC TA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA