| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213692079
Identifier: 213692079
GI number: 213692079
Start: 1383619
End: 1384392
Strand: Reverse
Name: 213692079
Synonym: Blon_1198
Alternate gene names: NA
Gene position: 1384392-1383619 (Counterclockwise)
Preceding gene: 213692080
Following gene: 213692077
Centisome position: 48.87
GC content: 68.99
Gene sequence:
>774_bases ATGAGCACAGACAGGAACAACCGGAGCCACAGGCCGAAGGGCCTGCCCCAAGGCGTGGCCGGAACATTCGAGCCAGGGAC GGGCGCCGGACCCGATCCCGACGTCCGTCCGCCCGAACCGCCAGACCGCATCGAACTCATGGAACTCGAACGCCTCGCCC GGACCATGCCCGCCCCAGCCCCCGGCGACATCGCATGGCGGTTCGGCGAACACACCATTCCCCAGCAGGCCATCGACATG CGCTACGGACGCGACGACATACGCCTCCAACGGCTCGTCATCCTCACCCACGCGGACGAGGACACGCGCCGCATGCTCGC CGTGCACATGCACGACCACGATTGGATCCGCAGCCACGCCACACCCCTGTTCAAGGACCGCGCGTGCGTCATCATCCCCC GACCCGACCCCTGGGAGACGACCGGCACGAACCCGCCCGCCGACGCCATGCCGGACACACGCCCCGTCTGGCCGCACCCC GTGGACACGGACCTGATCGCCGAAGACTGCGCCGCCCACCTCGACATCCGACGCTCATACACGCCCACACGCGTCAGCCG CACAGGGAACGAAACCCACGTCGAATGCGTGGACGACACGACCCACGCACGCCGCTCCTACCGGACCGAATCGAACATCG CGCATCTCCCCGACGGAGCCTGCATCGAACAGGCGGCCGACGAACGATGGCATGTCGTCCACGACGATCCGCCGCTCCCC CCCCCCACGCCCCGCCGACAGGCCGCCCGCACGCGAAGACACGCACCCGCATGA
Upstream 100 bases:
>100_bases CGTGGCCGCCACGCCGCTCGAACGCGACGCGCCCTGGACCCGGGTGGCGACACGCATCCCCAACCATCCCATCCCCAGCC CATACGCATAGGCGCACCGC
Downstream 100 bases:
>100_bases ACCCCGACCCGACACGGAACCGGAACCGCCCAGGCGATCCGACGACGCGGACAGGCCACGACGCCCGGCCGCCGACCCGC GCATGCGCCAGGCCTGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MSTDRNNRSHRPKGLPQGVAGTFEPGTGAGPDPDVRPPEPPDRIELMELERLARTMPAPAPGDIAWRFGEHTIPQQAIDM RYGRDDIRLQRLVILTHADEDTRRMLAVHMHDHDWIRSHATPLFKDRACVIIPRPDPWETTGTNPPADAMPDTRPVWPHP VDTDLIAEDCAAHLDIRRSYTPTRVSRTGNETHVECVDDTTHARRSYRTESNIAHLPDGACIEQAADERWHVVHDDPPLP PPTPRRQAARTRRHAPA
Sequences:
>Translated_257_residues MSTDRNNRSHRPKGLPQGVAGTFEPGTGAGPDPDVRPPEPPDRIELMELERLARTMPAPAPGDIAWRFGEHTIPQQAIDM RYGRDDIRLQRLVILTHADEDTRRMLAVHMHDHDWIRSHATPLFKDRACVIIPRPDPWETTGTNPPADAMPDTRPVWPHP VDTDLIAEDCAAHLDIRRSYTPTRVSRTGNETHVECVDDTTHARRSYRTESNIAHLPDGACIEQAADERWHVVHDDPPLP PPTPRRQAARTRRHAPA >Mature_256_residues STDRNNRSHRPKGLPQGVAGTFEPGTGAGPDPDVRPPEPPDRIELMELERLARTMPAPAPGDIAWRFGEHTIPQQAIDMR YGRDDIRLQRLVILTHADEDTRRMLAVHMHDHDWIRSHATPLFKDRACVIIPRPDPWETTGTNPPADAMPDTRPVWPHPV DTDLIAEDCAAHLDIRRSYTPTRVSRTGNETHVECVDDTTHARRSYRTESNIAHLPDGACIEQAADERWHVVHDDPPLPP PTPRRQAARTRRHAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29041; Mature: 28910
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDRNNRSHRPKGLPQGVAGTFEPGTGAGPDPDVRPPEPPDRIELMELERLARTMPAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PGDIAWRFGEHTIPQQAIDMRYGRDDIRLQRLVILTHADEDTRRMLAVHMHDHDWIRSHA CCCEEEECCCCCCCHHHHHHHCCCCHHEEEEEEEEEECCHHHHEEEEEEECCHHHHHHHC TPLFKDRACVIIPRPDPWETTGTNPPADAMPDTRPVWPHPVDTDLIAEDCAAHLDIRRSY CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TPTRVSRTGNETHVECVDDTTHARRSYRTESNIAHLPDGACIEQAADERWHVVHDDPPLP CCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCC PPTPRRQAARTRRHAPA CCCCHHHHHHHHHCCCC >Mature Secondary Structure STDRNNRSHRPKGLPQGVAGTFEPGTGAGPDPDVRPPEPPDRIELMELERLARTMPAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC PGDIAWRFGEHTIPQQAIDMRYGRDDIRLQRLVILTHADEDTRRMLAVHMHDHDWIRSHA CCCEEEECCCCCCCHHHHHHHCCCCHHEEEEEEEEEECCHHHHEEEEEEECCHHHHHHHC TPLFKDRACVIIPRPDPWETTGTNPPADAMPDTRPVWPHPVDTDLIAEDCAAHLDIRRSY CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC TPTRVSRTGNETHVECVDDTTHARRSYRTESNIAHLPDGACIEQAADERWHVVHDDPPLP CCCHHHCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCC PPTPRRQAARTRRHAPA CCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA