Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

Click here to switch to the map view.

The map label for this gene is 213692080

Identifier: 213692080

GI number: 213692080

Start: 1384402

End: 1384743

Strand: Reverse

Name: 213692080

Synonym: Blon_1199

Alternate gene names: NA

Gene position: 1384743-1384402 (Counterclockwise)

Preceding gene: 213692081

Following gene: 213692079

Centisome position: 48.88

GC content: 66.67

Gene sequence:

>342_bases
ATGAAGCCACGCATGCAATACCGGAGCCGACGCGTCCAAAACGTCCTGTTCGAACCCGATCATGCGAGCATGATCGTCCG
CAACAGGCAGGGCCGCCACTACCTGATCCACGGCGACGACACCCGTCTCATCACCGGGTTCGGCGACCCCCTGGACGCGC
CCGCCACCATGGGCTACGGCATCTACCATGACGCCGACCGGCCGAACACATTGTGGATACGCGACCGGACCGGCCTGCGC
CCCATCCAAGGCGTGGCCGCCACGCCGCTCGAACGCGACGCGCCCTGGACCCGGGTGGCGACACGCATCCCCAACCATCC
CATCCCCAGCCCATACGCATAG

Upstream 100 bases:

>100_bases
TCGCCAGCATCATGGTCGAAACCCGATGGGACACGGCCGCCGACCCCGTGGCACGCCATGACATCGCCGACGCGATCGCA
CGCGCCACAAGGGGACGCGC

Downstream 100 bases:

>100_bases
GCGCACCGCATGAGCACAGACAGGAACAACCGGAGCCACAGGCCGAAGGGCCTGCCCCAAGGCGTGGCCGGAACATTCGA
GCCAGGGACGGGCGCCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MKPRMQYRSRRVQNVLFEPDHASMIVRNRQGRHYLIHGDDTRLITGFGDPLDAPATMGYGIYHDADRPNTLWIRDRTGLR
PIQGVAATPLERDAPWTRVATRIPNHPIPSPYA

Sequences:

>Translated_113_residues
MKPRMQYRSRRVQNVLFEPDHASMIVRNRQGRHYLIHGDDTRLITGFGDPLDAPATMGYGIYHDADRPNTLWIRDRTGLR
PIQGVAATPLERDAPWTRVATRIPNHPIPSPYA
>Mature_113_residues
MKPRMQYRSRRVQNVLFEPDHASMIVRNRQGRHYLIHGDDTRLITGFGDPLDAPATMGYGIYHDADRPNTLWIRDRTGLR
PIQGVAATPLERDAPWTRVATRIPNHPIPSPYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12970; Mature: 12970

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRMQYRSRRVQNVLFEPDHASMIVRNRQGRHYLIHGDDTRLITGFGDPLDAPATMGYG
CCCHHHHHHHHHHHCEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCCCCCC
IYHDADRPNTLWIRDRTGLRPIQGVAATPLERDAPWTRVATRIPNHPIPSPYA
EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKPRMQYRSRRVQNVLFEPDHASMIVRNRQGRHYLIHGDDTRLITGFGDPLDAPATMGYG
CCCHHHHHHHHHHHCEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCCCCCCCCCC
IYHDADRPNTLWIRDRTGLRPIQGVAATPLERDAPWTRVATRIPNHPIPSPYA
EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA