Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213692041

Identifier: 213692041

GI number: 213692041

Start: 1340763

End: 1341209

Strand: Direct

Name: 213692041

Synonym: Blon_1159

Alternate gene names: NA

Gene position: 1340763-1341209 (Clockwise)

Preceding gene: 213692040

Following gene: 213692042

Centisome position: 47.33

GC content: 62.86

Gene sequence:

>447_bases
GTGGAACAGTCCATTATGCTTATCGTGATCATCGTCGTTTTCGGCGGCATGATGTGGTGGCAGTCCAAGAAGGCCAAGCA
GCAGCAGCAGGAGAAACAGGACTTCCGTCGCAACCTGCAGCCCGGCACCGAGGTCATCACCATCGGTCAGGTGATCGGCA
AGGTCGTCGAGGTCGATGAGCAGTACGAGGAGATCGTCATCGACTCCGAGGGATCCAAGCTGCGTTTCGGTTTCAACGCC
ATCGCCCGCGAATACATCCGCCCGGCCTACGTGTCCGATGCCGAGGTCGACGAGAACGGCGATCCGCTTCCCGACCAGGA
TGCCGGGACCCCGACCGCCGACGAGTCCGGGCAGACCCCGATCGAGGCGTCCATCACGTCCGGAGAGAACGATGCGGCCG
AGGACATCGACTCCCCGGCCGCCGCAGACGGGACCGCCACGAAGTAG

Upstream 100 bases:

>100_bases
GGATTACGCCAAGGGATGATGTCAGCAAGCCCTTCTAGACTTTTCCTGTTTGCACACTTGGCGACATTTCGTCAATGCCG
TTCATCTGAAGGAGTTTTCC

Downstream 100 bases:

>100_bases
GCCGTACGATTTGGCGGCGTCGCAGCACATCAGTACAGGAGGGTGAATATTATGGCACAGTCGGACATCACCATCGACGC
ATTGGACAAGGTGGGACGGC

Product: preprotein translocase YajC subunit

Products: NA

Alternate protein names: Protein Translocase Subunit YajC; Preprotein Translocase Subunit; YajC Protein Translocase Subunit

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MEQSIMLIVIIVVFGGMMWWQSKKAKQQQQEKQDFRRNLQPGTEVITIGQVIGKVVEVDEQYEEIVIDSEGSKLRFGFNA
IAREYIRPAYVSDAEVDENGDPLPDQDAGTPTADESGQTPIEASITSGENDAAEDIDSPAAADGTATK

Sequences:

>Translated_148_residues
MEQSIMLIVIIVVFGGMMWWQSKKAKQQQQEKQDFRRNLQPGTEVITIGQVIGKVVEVDEQYEEIVIDSEGSKLRFGFNA
IAREYIRPAYVSDAEVDENGDPLPDQDAGTPTADESGQTPIEASITSGENDAAEDIDSPAAADGTATK
>Mature_148_residues
MEQSIMLIVIIVVFGGMMWWQSKKAKQQQQEKQDFRRNLQPGTEVITIGQVIGKVVEVDEQYEEIVIDSEGSKLRFGFNA
IAREYIRPAYVSDAEVDENGDPLPDQDAGTPTADESGQTPIEASITSGENDAAEDIDSPAAADGTATK

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16178; Mature: 16178

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQSIMLIVIIVVFGGMMWWQSKKAKQQQQEKQDFRRNLQPGTEVITIGQVIGKVVEVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH
QYEEIVIDSEGSKLRFGFNAIAREYIRPAYVSDAEVDENGDPLPDQDAGTPTADESGQTP
HHHHEEECCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IEASITSGENDAAEDIDSPAAADGTATK
CEEEECCCCCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEQSIMLIVIIVVFGGMMWWQSKKAKQQQQEKQDFRRNLQPGTEVITIGQVIGKVVEVDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH
QYEEIVIDSEGSKLRFGFNAIAREYIRPAYVSDAEVDENGDPLPDQDAGTPTADESGQTP
HHHHEEECCCCCEEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
IEASITSGENDAAEDIDSPAAADGTATK
CEEEECCCCCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA