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The map label for this gene is ruvB

Identifier: 213692040

GI number: 213692040

Start: 1339636

End: 1340700

Strand: Direct

Name: ruvB

Synonym: Blon_1158

Alternate gene names: 213692040

Gene position: 1339636-1340700 (Clockwise)

Preceding gene: 213692039

Following gene: 213692041

Centisome position: 47.29

GC content: 63.66

Gene sequence:

>1065_bases
ATGAACGAGACGACGGATTACGGCGCCTCCAACACCGGTGCCAACGAGGAGTCGTTACGCATGGTCTCCTCGCAGCCGAT
CGGCAACGAGCCGGCCAGCGATGAGGAATTGCGCCCGCATGTCCTCGGGGGATTCATCGGCCAGCCCCGGCTCAAAGCCC
AGCTGCAGCTGTTCCTCGACGCCGCGCGCAAGCGGGACGTGCCGCCCGATCATATCCTGCTCGCCGGCCCACCCGGTTTG
GGCAAGACCACGTTGGCCATGATCGTGGCCAACGAGCTCGAAGTGCCGATTCGCGTCACTTCCGGGCCTGCGGTCCAACA
CGCCGGCGATCTCGCCTCGATTCTCAGTTCGCTTGATACCGGTGAGGTGTTGTTCATCGACGAGATCCACCGCCTGCCGC
GCGCCGCCGAGGAGTTGCTGTACATCGCGATGGAGGATTTCCGCGTCGACGTGATGGTCGGCAAGGGTCCGGGCGCCAGC
TCCATTCCGTTGACCCTGCCGCGGTTCACCGTCATCGGCGCCACCACGCGCGAGGGCATGTTGCCGAGTCCGTTGCGCGC
ACGCTTCGGTTTCACCGCACATCTTGACTTCTACCCGCACGACGAGCTGCAGAAGCTCATCGAACGTTCGGCCAATGTGC
TGGGCGTGAATCTTGGCGACGGCTCGGCTCGGGAACTCGCGTTGCGTTCGCGCGGCACGCCGCGCATCGCCAATCGTCTG
CTGCGCCGTGTGCGCGATTGGGCGATCGTGCATGACCTGATCGAGGTGCGGTCGGATGACGTCAAGGAGGCCTTGGCCTT
ATACCAGATCGATTCGGAGGGTCTTGACCGCCTGGACATCGCCGTACTCGACGCCATCGTGCGTAATTTCAATGGTGGGC
CCGTGGGACTGAACAACCTTGCGGCCATGGTGGGCGAGGAGTCGGAGACCGTGGAAACCGTATGCGAGCCGTATCTCGTG
CGTGAGGGTTTCCTGATCCGCACCCCGAAAGGCCGCGTGGCCACTGAGAAGGCCTGGCGACACCTGGGGATTACGCCAAG
GGATGATGTCAGCAAGCCCTTCTAG

Upstream 100 bases:

>100_bases
ACGAAGCCTGCGCAGAGAACGATGTTCCCATGCCGCTGGCCTCCGACGATGCGCCGCGTGTGCTGCGGCTCGCCTTGGCC
CGTATGGATAGGGGGCGCTG

Downstream 100 bases:

>100_bases
ACTTTTCCTGTTTGCACACTTGGCGACATTTCGTCAATGCCGTTCATCTGAAGGAGTTTTCCGTGGAACAGTCCATTATG
CTTATCGTGATCATCGTCGT

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNETTDYGASNTGANEESLRMVSSQPIGNEPASDEELRPHVLGGFIGQPRLKAQLQLFLDAARKRDVPPDHILLAGPPGL
GKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDTGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGAS
SIPLTLPRFTVIGATTREGMLPSPLRARFGFTAHLDFYPHDELQKLIERSANVLGVNLGDGSARELALRSRGTPRIANRL
LRRVRDWAIVHDLIEVRSDDVKEALALYQIDSEGLDRLDIAVLDAIVRNFNGGPVGLNNLAAMVGEESETVETVCEPYLV
REGFLIRTPKGRVATEKAWRHLGITPRDDVSKPF

Sequences:

>Translated_354_residues
MNETTDYGASNTGANEESLRMVSSQPIGNEPASDEELRPHVLGGFIGQPRLKAQLQLFLDAARKRDVPPDHILLAGPPGL
GKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDTGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGAS
SIPLTLPRFTVIGATTREGMLPSPLRARFGFTAHLDFYPHDELQKLIERSANVLGVNLGDGSARELALRSRGTPRIANRL
LRRVRDWAIVHDLIEVRSDDVKEALALYQIDSEGLDRLDIAVLDAIVRNFNGGPVGLNNLAAMVGEESETVETVCEPYLV
REGFLIRTPKGRVATEKAWRHLGITPRDDVSKPF
>Mature_354_residues
MNETTDYGASNTGANEESLRMVSSQPIGNEPASDEELRPHVLGGFIGQPRLKAQLQLFLDAARKRDVPPDHILLAGPPGL
GKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDTGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGAS
SIPLTLPRFTVIGATTREGMLPSPLRARFGFTAHLDFYPHDELQKLIERSANVLGVNLGDGSARELALRSRGTPRIANRL
LRRVRDWAIVHDLIEVRSDDVKEALALYQIDSEGLDRLDIAVLDAIVRNFNGGPVGLNNLAAMVGEESETVETVCEPYLV
REGFLIRTPKGRVATEKAWRHLGITPRDDVSKPF

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family

Homologues:

Organism=Escherichia coli, GI1788167, Length=330, Percent_Identity=52.7272727272727, Blast_Score=353, Evalue=8e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVB_BIFLI (B7GR18)

Other databases:

- EMBL:   CP001095
- RefSeq:   YP_002322626.1
- GeneID:   7053324
- GenomeReviews:   CP001095_GR
- KEGG:   bln:Blon_1158
- HOGENOM:   HBG339960
- ProtClustDB:   PRK00080
- HAMAP:   MF_00016
- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- ProDom:   PD005323
- SMART:   SM00382
- TIGRFAMs:   TIGR00635

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N

EC number: =3.6.4.12

Molecular weight: Translated: 38683; Mature: 38683

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNETTDYGASNTGANEESLRMVSSQPIGNEPASDEELRPHVLGGFIGQPRLKAQLQLFLD
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDT
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
CCEEEHHHHHHHHHHHHHHHHHHEECEEEEEEEECCCCCCCCCEECCCEEEEECCCCCCC
LPSPLRARFGFTAHLDFYPHDELQKLIERSANVLGVNLGDGSARELALRSRGTPRIANRL
CCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHH
LRRVRDWAIVHDLIEVRSDDVKEALALYQIDSEGLDRLDIAVLDAIVRNFNGGPVGLNNL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
AAMVGEESETVETVCEPYLVREGFLIRTPKGRVATEKAWRHLGITPRDDVSKPF
HHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNETTDYGASNTGANEESLRMVSSQPIGNEPASDEELRPHVLGGFIGQPRLKAQLQLFLD
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHH
AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAVQHAGDLASILSSLDT
HHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCC
GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM
CCEEEHHHHHHHHHHHHHHHHHHEECEEEEEEEECCCCCCCCCEECCCEEEEECCCCCCC
LPSPLRARFGFTAHLDFYPHDELQKLIERSANVLGVNLGDGSARELALRSRGTPRIANRL
CCCCHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCHHHHHHH
LRRVRDWAIVHDLIEVRSDDVKEALALYQIDSEGLDRLDIAVLDAIVRNFNGGPVGLNNL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
AAMVGEESETVETVCEPYLVREGFLIRTPKGRVATEKAWRHLGITPRDDVSKPF
HHHHCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA