| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is apt
Identifier: 213692042
GI number: 213692042
Start: 1341261
End: 1341842
Strand: Direct
Name: apt
Synonym: Blon_1160
Alternate gene names: 213692042
Gene position: 1341261-1341842 (Clockwise)
Preceding gene: 213692041
Following gene: 213692043
Centisome position: 47.35
GC content: 64.09
Gene sequence:
>582_bases ATGGCACAGTCGGACATCACCATCGACGCATTGGACAAGGTGGGACGGCAGGACGCCGAATATCTGGTGTCGTTGGTGCG TTCCATACCCGGGTTCCCCAAGGAAGGCATCATCTTCCGTGATTTCATTCCGGTGTTCGCCGATCCCAAGGGCCTGAGAA TCCTGCTCGAGGCGCTTGAGGCGGCCCTGCCGGTGCCCGCGAGCGAATTCGATTCCATCGCCGGCCTCGAGTCGCGCGGA TTCCTGTTCGGCCCGGCTCTGGCCGCCCGCATGGGCAAGGGGTTCATCGCCGTACGCAAGGCCGGCAAGCTGCCGCCCGA GACCATCGGCGAATCCTATGATCTCGAATACGGCTCGGCGCGCGTCGAAATCGAGACGGATGCCGTGCAGGCGGGGGAGC GGGTACTTATCGTCGATGACCTCATCGCCACGGGCGGCACCGCCAAGGCCGCCACCGATCTTATCGACAAGGTGGGAGGC ACCGTGGCGGGTTATGGTTTCGTGATGCGGCTCGAAGGCCTCGACGGCATCGACAAGCTTGGCGGCAAGCCCGTCAGCTC GCTGATGGCGATGCCGGCCTGA
Upstream 100 bases:
>100_bases CGAGGACATCGACTCCCCGGCCGCCGCAGACGGGACCGCCACGAAGTAGGCCGTACGATTTGGCGGCGTCGCAGCACATC AGTACAGGAGGGTGAATATT
Downstream 100 bases:
>100_bases GCGTTCGTCTCACCCAACATACATTCGGTTTTTAAGGTCCGTCATGTACTGTGTACAGTTACATGACGGACCAATTACAT AGTCAGGGAAGGATCGATGG
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MAQSDITIDALDKVGRQDAEYLVSLVRSIPGFPKEGIIFRDFIPVFADPKGLRILLEALEAALPVPASEFDSIAGLESRG FLFGPALAARMGKGFIAVRKAGKLPPETIGESYDLEYGSARVEIETDAVQAGERVLIVDDLIATGGTAKAATDLIDKVGG TVAGYGFVMRLEGLDGIDKLGGKPVSSLMAMPA
Sequences:
>Translated_193_residues MAQSDITIDALDKVGRQDAEYLVSLVRSIPGFPKEGIIFRDFIPVFADPKGLRILLEALEAALPVPASEFDSIAGLESRG FLFGPALAARMGKGFIAVRKAGKLPPETIGESYDLEYGSARVEIETDAVQAGERVLIVDDLIATGGTAKAATDLIDKVGG TVAGYGFVMRLEGLDGIDKLGGKPVSSLMAMPA >Mature_192_residues AQSDITIDALDKVGRQDAEYLVSLVRSIPGFPKEGIIFRDFIPVFADPKGLRILLEALEAALPVPASEFDSIAGLESRGF LFGPALAARMGKGFIAVRKAGKLPPETIGESYDLEYGSARVEIETDAVQAGERVLIVDDLIATGGTAKAATDLIDKVGGT VAGYGFVMRLEGLDGIDKLGGKPVSSLMAMPA
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=165, Percent_Identity=45.4545454545455, Blast_Score=140, Evalue=6e-34, Organism=Homo sapiens, GI71773201, Length=121, Percent_Identity=50.4132231404959, Blast_Score=121, Evalue=4e-28, Organism=Escherichia coli, GI1786675, Length=176, Percent_Identity=43.1818181818182, Blast_Score=143, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17509087, Length=165, Percent_Identity=43.6363636363636, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323619, Length=166, Percent_Identity=47.5903614457831, Blast_Score=139, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6320649, Length=178, Percent_Identity=35.9550561797753, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI17136334, Length=183, Percent_Identity=43.7158469945355, Blast_Score=132, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_BIFLI (B7GR20)
Other databases:
- EMBL: CP001095 - RefSeq: YP_002322628.1 - ProteinModelPortal: B7GR20 - GeneID: 7053326 - GenomeReviews: CP001095_GR - KEGG: bln:Blon_1160 - HOGENOM: HBG703830 - ProtClustDB: PRK02304 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 20298; Mature: 20166
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSDITIDALDKVGRQDAEYLVSLVRSIPGFPKEGIIFRDFIPVFADPKGLRILLEALE CCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEHHHCHHHHCCCHHHHHHHHHHH AALPVPASEFDSIAGLESRGFLFGPALAARMGKGFIAVRKAGKLPPETIGESYDLEYGSA HHCCCCHHHHHHHCCCCCCCCEEHHHHHHHHCCCEEEEHHCCCCCHHHCCCCCCCCCCCE RVEIETDAVQAGERVLIVDDLIATGGTAKAATDLIDKVGGTVAGYGFVMRLEGLDGIDKL EEEEEHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCEECCEEEEEECCCCCHHHH GGKPVSSLMAMPA CCCCHHHHHCCCC >Mature Secondary Structure AQSDITIDALDKVGRQDAEYLVSLVRSIPGFPKEGIIFRDFIPVFADPKGLRILLEALE CCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEHHHCHHHHCCCHHHHHHHHHHH AALPVPASEFDSIAGLESRGFLFGPALAARMGKGFIAVRKAGKLPPETIGESYDLEYGSA HHCCCCHHHHHHHCCCCCCCCEEHHHHHHHHCCCEEEEHHCCCCCHHHCCCCCCCCCCCE RVEIETDAVQAGERVLIVDDLIATGGTAKAATDLIDKVGGTVAGYGFVMRLEGLDGIDKL EEEEEHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCEECCEEEEEECCCCCHHHH GGKPVSSLMAMPA CCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA