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The map label for this gene is whiA [H]

Identifier: 213691968

GI number: 213691968

Start: 1272398

End: 1273348

Strand: Direct

Name: whiA [H]

Synonym: Blon_1086

Alternate gene names: 213691968

Gene position: 1272398-1273348 (Clockwise)

Preceding gene: 213691967

Following gene: 213691969

Centisome position: 44.92

GC content: 61.51

Gene sequence:

>951_bases
TTGGCTCTTCTGGACGATGTCAAAAGCGAGTTGGCGGCCTTTGAAGGCGATTCGCCAGCCGCGATCAAGGCCCAAGCTGC
GGCCATGATCCGTTTTGGCGGCGGTCTTCGACCGGTACAGAATACATACGTTATCCAAGCCGTATTCACCTCGCTTGACG
TTGCAGAATGGCTGAAGAACACGTTGAGGAACACGTTCGGGCACGAAGCCGAGATCAACCACCTCACCCGTCAGACCCCG
AACGGCCCTGTCGAGACCTACGTGGTGCTCGTCACCCGCAACGTAGTGGCCTTGGCTTTGCAGACCGGACTGGTCGACCG
CCGCAAGCAGCAGGTCCGTGGACTGCCGTCTGAAGTGGTCAACGGATCCATCGCCCAAATCAAAGCGGCATGGCGCGGCG
CCTTCATGGCCCGTGGCTTCCTATCCGATCCCGGTAAAGCCAGCTTCCTGGAAATCGCTTGCCCTACGGAAGAGGCCGCC
ATGGCCCTGTGTGGCGTGGCCCGTCGTCTCGGCATCCAGGCCAAGCATCGCACGCTGCGCAGCTCCGAGCGCGTGACCCT
CAAGGATCCCGACGCCATCGAACGCATGCTCAAGCTCATGGGCGCCACCCGTTCGGCCCGCGAATGGACCGGCAAGCGCT
CCGATGGAGAGGCCCGCGGCAAGGCCAATCGTCTGGCCAACTTCGATGACGCCAATATGCGCCGTTCCGCCAAGGCCGCC
GCCGAAGCCAGCGAAAAAGTGCAACATGCTTTCGAAGTGCTCGGCGATAACATTCCGGACAACCTCCGTCAGGCCGGCCA
GCTGCGCATCGATCACGTGGACAAGAGCCTCGAGGAGCTCGGCAAGATCGCCGAACCGCAGATCACCAAGGATGCGATTG
CCGGACGAATTCGCCGACTGCTTCAGCTTGCCGAGAAGACGGAGAAGGCTCGAGCAGCCGAAGGCAAGTAA

Upstream 100 bases:

>100_bases
TAGGTATCACAGAAAGCCGATGGCTTCCGACCGTGTGACAGCAAATAACGGCACGAAGCGCCTGAAGCATTGAGAAGAAC
GGGACTGTAGGAGGTAGATC

Downstream 100 bases:

>100_bases
CCCGACAATCCGATTTGTCGTGCCTATTCGGCAGAACGCGACAACGACAGAACAAAACACCGCATTCAGTCAGTAGACGA
ATGCGGTGTTTTGTTCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MALLDDVKSELAAFEGDSPAAIKAQAAAMIRFGGGLRPVQNTYVIQAVFTSLDVAEWLKNTLRNTFGHEAEINHLTRQTP
NGPVETYVVLVTRNVVALALQTGLVDRRKQQVRGLPSEVVNGSIAQIKAAWRGAFMARGFLSDPGKASFLEIACPTEEAA
MALCGVARRLGIQAKHRTLRSSERVTLKDPDAIERMLKLMGATRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKAA
AEASEKVQHAFEVLGDNIPDNLRQAGQLRIDHVDKSLEELGKIAEPQITKDAIAGRIRRLLQLAEKTEKARAAEGK

Sequences:

>Translated_316_residues
MALLDDVKSELAAFEGDSPAAIKAQAAAMIRFGGGLRPVQNTYVIQAVFTSLDVAEWLKNTLRNTFGHEAEINHLTRQTP
NGPVETYVVLVTRNVVALALQTGLVDRRKQQVRGLPSEVVNGSIAQIKAAWRGAFMARGFLSDPGKASFLEIACPTEEAA
MALCGVARRLGIQAKHRTLRSSERVTLKDPDAIERMLKLMGATRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKAA
AEASEKVQHAFEVLGDNIPDNLRQAGQLRIDHVDKSLEELGKIAEPQITKDAIAGRIRRLLQLAEKTEKARAAEGK
>Mature_315_residues
ALLDDVKSELAAFEGDSPAAIKAQAAAMIRFGGGLRPVQNTYVIQAVFTSLDVAEWLKNTLRNTFGHEAEINHLTRQTPN
GPVETYVVLVTRNVVALALQTGLVDRRKQQVRGLPSEVVNGSIAQIKAAWRGAFMARGFLSDPGKASFLEIACPTEEAAM
ALCGVARRLGIQAKHRTLRSSERVTLKDPDAIERMLKLMGATRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKAAA
EASEKVQHAFEVLGDNIPDNLRQAGQLRIDHVDKSLEELGKIAEPQITKDAIAGRIRRLLQLAEKTEKARAAEGK

Specific function: May be required for sporulation [H]

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478 [H]

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N [H]

EC number: NA

Molecular weight: Translated: 34513; Mature: 34382

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLDDVKSELAAFEGDSPAAIKAQAAAMIRFGGGLRPVQNTYVIQAVFTSLDVAEWLKN
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLRNTFGHEAEINHLTRQTPNGPVETYVVLVTRNVVALALQTGLVDRRKQQVRGLPSEVV
HHHHHCCCCHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NGSIAQIKAAWRGAFMARGFLSDPGKASFLEIACPTEEAAMALCGVARRLGIQAKHRTLR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
SSERVTLKDPDAIERMLKLMGATRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKAA
CCCCEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
AEASEKVQHAFEVLGDNIPDNLRQAGQLRIDHVDKSLEELGKIAEPQITKDAIAGRIRRL
HHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQLAEKTEKARAAEGK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ALLDDVKSELAAFEGDSPAAIKAQAAAMIRFGGGLRPVQNTYVIQAVFTSLDVAEWLKN
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TLRNTFGHEAEINHLTRQTPNGPVETYVVLVTRNVVALALQTGLVDRRKQQVRGLPSEVV
HHHHHCCCCHHHHHHHHCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
NGSIAQIKAAWRGAFMARGFLSDPGKASFLEIACPTEEAAMALCGVARRLGIQAKHRTLR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH
SSERVTLKDPDAIERMLKLMGATRSAREWTGKRSDGEARGKANRLANFDDANMRRSAKAA
CCCCEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
AEASEKVQHAFEVLGDNIPDNLRQAGQLRIDHVDKSLEELGKIAEPQITKDAIAGRIRRL
HHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LQLAEKTEKARAAEGK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA