| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is yhbJ [C]
Identifier: 213691967
GI number: 213691967
Start: 1271213
End: 1272199
Strand: Direct
Name: yhbJ [C]
Synonym: Blon_1085
Alternate gene names: 213691967
Gene position: 1271213-1272199 (Clockwise)
Preceding gene: 213691966
Following gene: 213691968
Centisome position: 44.88
GC content: 60.59
Gene sequence:
>987_bases ATGAGTCAACAGACAACAATCCGCGATACCGGCGAGGCGGCCGCCACGAATGCGCCGGCGAATTCCGCGACATCCACATC GACTCCGGACAACCAGCCGACCCCGCTTGATGCCTTCGAAGTGCTGCTCATCACCGGTATGTCCGGCGCAGGCCGCTCTC ATGCCGCTGACTGCGTGGAAGACATGGGATGGTATGTGGTCGACAACCTGCCTCCCAAACTGCTTATCCCGCTTGTCGAC ATGATGACCACCTCCGGTTCCGGATCGGGGTCGGGCGTCCACAAGCTTGCCGCCGTCATCGACGTGCGCTCCAGCTATTT CGACGAGCTGGCCGCCGTGCTCGGCCATCTGGATGATCTCGGCGTCAAAACCCATATTCTGTTCCTCGACGCCAGCAACG AAGTGCTCATCAAGCGCTATGAATCCGTGCGCCGCCCGCACCCGCTGCAGCACGGCAACCGACTGATCGACGGCATCCTT GAGGAACGTCACCTGCTGGAAGACCTCAAGGAGCGAGCCGACTGGGTCATCGACACCAGCTCCCTGAGCATCCACCAGCT GTCCACCAAACTCTACGAGACGATGCTCGGTTCAGGCCCCACCACCGTGGCGGTACACATCTTCAGCTTCGGCTTCAAAT ACGGCATGCCCATCGACGCCGATTTCGTGGCCGACGTGCGTTTTCTGCCCAACCCGTTCTGGGTGCCCAACCTGCGCGAG CTTACCGGGCACGACAAGCCGGTCGCCGACTACGTGCTTTCCAGCAAGGGTGCCAAGGAATTTCTCGACGCTTATGAGAA AGCTATCGAGATTGCGTTGGAAGGATACGCCCAGGAAGACAAGCACTACGTAACCATCGCCGTCGGCTGCACCGGTGGCC AGCACCGGTCGGTGGCGATGAGCGAGGAGCTGGCTCGCCGCTTACGCGCACATGGGCTCAACGTAACCGTTTCCGCGAGA GAACAGCACAAGCGTCACTCATCGTAA
Upstream 100 bases:
>100_bases ACGACCCGCCCAGCGATGCCGACCAGCGTCTGCAGGACACCACCACCGAAGACGACCAGCTGGAGATCGCGATGCGCAAA GCTCTTGAGGAGGCGTTGTA
Downstream 100 bases:
>100_bases GCAGGCGTCGAGCGGTCATCGGGCAAGCGTTCGGTGACCACACTGCGAGAAAGCAAAGCCCATAATACGTATCAAACGGG TTCGCTTGTCCACCAGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MSQQTTIRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVEDMGWYVVDNLPPKLLIPLVD MMTTSGSGSGSGVHKLAAVIDVRSSYFDELAAVLGHLDDLGVKTHILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGIL EERHLLEDLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRE LTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAMSEELARRLRAHGLNVTVSAR EQHKRHSS
Sequences:
>Translated_328_residues MSQQTTIRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVEDMGWYVVDNLPPKLLIPLVD MMTTSGSGSGSGVHKLAAVIDVRSSYFDELAAVLGHLDDLGVKTHILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGIL EERHLLEDLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRE LTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAMSEELARRLRAHGLNVTVSAR EQHKRHSS >Mature_327_residues SQQTTIRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVEDMGWYVVDNLPPKLLIPLVDM MTTSGSGSGSGVHKLAAVIDVRSSYFDELAAVLGHLDDLGVKTHILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGILE ERHLLEDLKERADWVIDTSSLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLREL TGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAMSEELARRLRAHGLNVTVSARE QHKRHSS
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=291, Percent_Identity=40.5498281786942, Blast_Score=205, Evalue=3e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1085_BIFLI (B7GQU5)
Other databases:
- EMBL: CP001095 - RefSeq: YP_002322553.1 - GeneID: 7054703 - GenomeReviews: CP001095_GR - KEGG: bln:Blon_1085 - HOGENOM: HBG289732 - ProtClustDB: PRK05416 - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 35889; Mature: 35758
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQTTIRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVE CCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHH DMGWYVVDNLPPKLLIPLVDMMTTSGSGSGSGVHKLAAVIDVRSSYFDELAAVLGHLDDL HCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVKTHILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGILEERHLLEDLKERADWVIDTS CCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC SLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRE CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH LTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAM HCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHH SEELARRLRAHGLNVTVSAREQHKRHSS HHHHHHHHHHCCCCEEEECHHHHCCCCC >Mature Secondary Structure SQQTTIRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVE CCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCHHHHHHH DMGWYVVDNLPPKLLIPLVDMMTTSGSGSGSGVHKLAAVIDVRSSYFDELAAVLGHLDDL HCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GVKTHILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGILEERHLLEDLKERADWVIDTS CCEEEEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECC SLSIHQLSTKLYETMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRE CCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHH LTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAM HCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCHHH SEELARRLRAHGLNVTVSAREQHKRHSS HHHHHHHHHHCCCCEEEECHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA