| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is aroE [H]
Identifier: 213691966
GI number: 213691966
Start: 1270242
End: 1271213
Strand: Direct
Name: aroE [H]
Synonym: Blon_1084
Alternate gene names: 213691966
Gene position: 1270242-1271213 (Clockwise)
Preceding gene: 213691965
Following gene: 213691967
Centisome position: 44.84
GC content: 59.36
Gene sequence:
>972_bases ATGGCCAATCATCGTTGCGCTGTACTCGGCAAACCCGTCGCGCACTCATTGTCACCCGTGCTCCACAACGCGGCCTACCG TTCGCTGAAACTCGACGATTGGCTGTACGACAAGCACGAAGTGGGAGAGGATGACCTCGACGCTTTCCTCAAAGGCCTCG ACTCGACGTGGGCTGGCCTGAGCCTGACCATGCCGTTGAAAAAGGCCATCCAACCGTACGGTGTTCCGGAAAATCTGTGG GCCAAGGAACTGAAGGTGGCGAATACCGCGGTATTCGACTGGAGCGTGGCTACCGATGATCCCGCTTGGCCGAACGGCAA GCCAGACATCAAGCTATACAACACCGATGTCATCGGCATCCAACTCGCCTTCGACCATGCCAATCGCGAACTCGGCGAAC ACCACACCGCATCGAGAAGCGGCGCCGCGCTGATCATCGGCAATGGCAACACCGCCACTTCGGCGTTAGCCGCATGCTGC ATGATGCCCGAAATCGGCCATATCATCGTCGCCGCCCGCCACCCCGGAAAAAACACCGGGCTTAAACCAGTGGCCGAGAA GTTCGTCAACGTGCATAACCCGTATAGCGAAATCGAATTAGGCGACGATCAGGCCCTGCTCGAGGCAGCCCGCAACGCCA CCTATGTCATCAACACGATTCCCGGACATGCGGCCGACAACGTCGCGGATGCCCTCACCAATGCCGGAACCGAGCCATTC TCCGGACTGCTGCTGGACGTGGTCTACGATCCACGCCCCACCAAGCTCATGGAAGCCTGGCGCGCTCATGGCGGTCACGC CATCGGCGGTGAAGAAATGCTGCTGTACCAAGCTCTCGTACAGGTATTGCTGATGACCGGTATCTGGGATGACGACCCGC CCAGCGATGCCGACCAGCGTCTGCAGGACACCACCACCGAAGACGACCAGCTGGAGATCGCGATGCGCAAAGCTCTTGAG GAGGCGTTGTAA
Upstream 100 bases:
>100_bases GGTCCAGCAGCCCAGAGTGAATTTTCGGTTGCGGGGCCTGTGGTTGACATATTCGAAGCAAAGTGTCGGCTAGCATGGGA ACAGACATCAAGGAGGGGAT
Downstream 100 bases:
>100_bases TGAGTCAACAGACAACAATCCGCGATACCGGCGAGGCGGCCGCCACGAATGCGCCGGCGAATTCCGCGACATCCACATCG ACTCCGGACAACCAGCCGAC
Product: Shikimate dehydrogenase substrate binding, N-terminal domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MANHRCAVLGKPVAHSLSPVLHNAAYRSLKLDDWLYDKHEVGEDDLDAFLKGLDSTWAGLSLTMPLKKAIQPYGVPENLW AKELKVANTAVFDWSVATDDPAWPNGKPDIKLYNTDVIGIQLAFDHANRELGEHHTASRSGAALIIGNGNTATSALAACC MMPEIGHIIVAARHPGKNTGLKPVAEKFVNVHNPYSEIELGDDQALLEAARNATYVINTIPGHAADNVADALTNAGTEPF SGLLLDVVYDPRPTKLMEAWRAHGGHAIGGEEMLLYQALVQVLLMTGIWDDDPPSDADQRLQDTTTEDDQLEIAMRKALE EAL
Sequences:
>Translated_323_residues MANHRCAVLGKPVAHSLSPVLHNAAYRSLKLDDWLYDKHEVGEDDLDAFLKGLDSTWAGLSLTMPLKKAIQPYGVPENLW AKELKVANTAVFDWSVATDDPAWPNGKPDIKLYNTDVIGIQLAFDHANRELGEHHTASRSGAALIIGNGNTATSALAACC MMPEIGHIIVAARHPGKNTGLKPVAEKFVNVHNPYSEIELGDDQALLEAARNATYVINTIPGHAADNVADALTNAGTEPF SGLLLDVVYDPRPTKLMEAWRAHGGHAIGGEEMLLYQALVQVLLMTGIWDDDPPSDADQRLQDTTTEDDQLEIAMRKALE EAL >Mature_322_residues ANHRCAVLGKPVAHSLSPVLHNAAYRSLKLDDWLYDKHEVGEDDLDAFLKGLDSTWAGLSLTMPLKKAIQPYGVPENLWA KELKVANTAVFDWSVATDDPAWPNGKPDIKLYNTDVIGIQLAFDHANRELGEHHTASRSGAALIIGNGNTATSALAACCM MPEIGHIIVAARHPGKNTGLKPVAEKFVNVHNPYSEIELGDDQALLEAARNATYVINTIPGHAADNVADALTNAGTEPFS GLLLDVVYDPRPTKLMEAWRAHGGHAIGGEEMLLYQALVQVLLMTGIWDDDPPSDADQRLQDTTTEDDQLEIAMRKALEE AL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320332, Length=292, Percent_Identity=27.0547945205479, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 35079; Mature: 34948
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANHRCAVLGKPVAHSLSPVLHNAAYRSLKLDDWLYDKHEVGEDDLDAFLKGLDSTWAGL CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHCCCCCCCE SLTMPLKKAIQPYGVPENLWAKELKVANTAVFDWSVATDDPAWPNGKPDIKLYNTDVIGI EEECCHHHCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEEEECEEEEE QLAFDHANRELGEHHTASRSGAALIIGNGNTATSALAACCMMPEIGHIIVAARHPGKNTG EEEECHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCC LKPVAEKFVNVHNPYSEIELGDDQALLEAARNATYVINTIPGHAADNVADALTNAGTEPF CCHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCH SGLLLDVVYDPRPTKLMEAWRAHGGHAIGGEEMLLYQALVQVLLMTGIWDDDPPSDADQR HCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LQDTTTEDDQLEIAMRKALEEAL HHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ANHRCAVLGKPVAHSLSPVLHNAAYRSLKLDDWLYDKHEVGEDDLDAFLKGLDSTWAGL CCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHCCHHHHHHHHHHCCCCCCCE SLTMPLKKAIQPYGVPENLWAKELKVANTAVFDWSVATDDPAWPNGKPDIKLYNTDVIGI EEECCHHHCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCEEEEECEEEEE QLAFDHANRELGEHHTASRSGAALIIGNGNTATSALAACCMMPEIGHIIVAARHPGKNTG EEEECHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCC LKPVAEKFVNVHNPYSEIELGDDQALLEAARNATYVINTIPGHAADNVADALTNAGTEPF CCHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCH SGLLLDVVYDPRPTKLMEAWRAHGGHAIGGEEMLLYQALVQVLLMTGIWDDDPPSDADQR HCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH LQDTTTEDDQLEIAMRKALEEAL HHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA