| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691910
Identifier: 213691910
GI number: 213691910
Start: 1208951
End: 1209340
Strand: Reverse
Name: 213691910
Synonym: Blon_1022
Alternate gene names: NA
Gene position: 1209340-1208951 (Counterclockwise)
Preceding gene: 213691911
Following gene: 213691896
Centisome position: 42.69
GC content: 41.79
Gene sequence:
>390_bases ATGAGCCTGAATGGCATGAAGAGTAACAGATGGGTTCAGGCTATATCAGTCATTGCCTTGATATATGTCTGCATGACAGG CATACTGATGTTCCAGGTATCTGCTGCATATTCTCAGTGGGAAGCAGATCAAGTTGTCTGGAATTTAGCGACTTTGGTCT CAGCGGAGACCGAAAAGGCAAATTCACGAGAATTCGGATTGACTGAATTTGAAAGACCTGAACTTCCGGAATATACCGAA CCGTCTCATAAATACAGTTTTTTTCCGTGGGAATTACTAAAGGAGAAGAACGATATCATAGCGAGCGATAAGCTCATGAA GCAACAGGCTGAATCTCATCTTGAATACGCGAACAGCGTTCTTAATAAATACAATCACCGCAATATATGA
Upstream 100 bases:
>100_bases CGTCATCAAATCACGTTGACGGAGTCGCTGCAGCATGCCCATGAACAAGGAAAAAATAATATGACCTGGTATGGGCTTCA ATATCGTTATGACTGAGAAA
Downstream 100 bases:
>100_bases GATAGGTGCTATCCCATATATTCCGTGGGATAGCACCTATCTTCTTGTTCTTTAGAATCGCTTTAATCTGGTCAGGTCTG TCAGCCCGGCCGTGACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MSLNGMKSNRWVQAISVIALIYVCMTGILMFQVSAAYSQWEADQVVWNLATLVSAETEKANSREFGLTEFERPELPEYTE PSHKYSFFPWELLKEKNDIIASDKLMKQQAESHLEYANSVLNKYNHRNI
Sequences:
>Translated_129_residues MSLNGMKSNRWVQAISVIALIYVCMTGILMFQVSAAYSQWEADQVVWNLATLVSAETEKANSREFGLTEFERPELPEYTE PSHKYSFFPWELLKEKNDIIASDKLMKQQAESHLEYANSVLNKYNHRNI >Mature_128_residues SLNGMKSNRWVQAISVIALIYVCMTGILMFQVSAAYSQWEADQVVWNLATLVSAETEKANSREFGLTEFERPELPEYTEP SHKYSFFPWELLKEKNDIIASDKLMKQQAESHLEYANSVLNKYNHRNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14953; Mature: 14822
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNGMKSNRWVQAISVIALIYVCMTGILMFQVSAAYSQWEADQVVWNLATLVSAETEKA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSREFGLTEFERPELPEYTEPSHKYSFFPWELLKEKNDIIASDKLMKQQAESHLEYANSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LNKYNHRNI HHHHCCCCC >Mature Secondary Structure SLNGMKSNRWVQAISVIALIYVCMTGILMFQVSAAYSQWEADQVVWNLATLVSAETEKA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NSREFGLTEFERPELPEYTEPSHKYSFFPWELLKEKNDIIASDKLMKQQAESHLEYANSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LNKYNHRNI HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA