| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691911
Identifier: 213691911
GI number: 213691911
Start: 1209345
End: 1210469
Strand: Reverse
Name: 213691911
Synonym: Blon_1023
Alternate gene names: NA
Gene position: 1210469-1209345 (Counterclockwise)
Preceding gene: 213691919
Following gene: 213691910
Centisome position: 42.73
GC content: 44.09
Gene sequence:
>1125_bases GTGTTAAATGCAAGAAAAAAGATTATTCCTCTGCTGACTGCTCTTTTAGTGCCGACTTTGTTGCTTCCTGCGAATGCATA TGCGTATGGAAGCGACAATGTGGAGATGCAAGAGATCCAGCAGACGCTTCATCAGTATTCACAAGAACTATTAGCCGAAT ATCATTCGCCGCGTACGAGGTCCAAACTGAATATCCCACTTACCGCTGAGGAACAAGCCAAAGAGGGTCTTATCAGCAAG AATGTTGAAGTCGTACCGACAATTAGAAGCATTCAATCATCAGATGACGGAGAGTATCTGATTGATACAGATATGACCGT GAACGTGAGTCTGGACGCAGACTCGGATACTGTTATTTATGTTAATGGTAAGCGCACGGACCATCTTGACCAGAGTTGGA CTTCTACGCATATCATGGAGTTTGCCCATGTGGGAAGGCAGCGAGGGTATTCAATTATTAGCGACAAAGTGATTGATGAA CAAGATCCACCGGAATATGCCGACGCATCGGATAAATTGCCGACCGAAGACAAAACACCTGCTTCTTTGGATGAAAATGG CGCATTGGAAAGTGAAGCACTCAACAAGGCTCAGACATATGCCTTCGGGGACAACTCCGTCGGAGTAAATTATATTAAGG CTATGAATTATGCCAATAAATGGACGAGTCCTGGATATGAGCATAAAATGAATTCCGCGTATCCGTCTTTTGGCTCTAAC TGTGCAAACTTTGTCTCGCAGGCTCTTCATGAAGGTGGAATGACTCTGACCAGACTGTGGAATTACTCTACTGTATTGCC GGACAAGCTGACGACACGTGCTTGGATGAATGCGGATAGCAATTATTCGTACATGAAGCATTATTCGCATAGTTATGACA GTTTGGATAATGTTTGGAAAGCATGGCAAGGCAGCATATTGTATGTAGATTGGACCTCAAATAATGAAATCGATCACGCT ATGTTCGTCGTGGGTGTTGTCGTAAAGGACGGCAAAGCCAATCCGGTCATAGATCAGAAGACAGAGAATCGTCATCAAAT CACGTTGACGGAGTCGCTGCAGCATGCCCATGAACAAGGAAAAAATAATATGACCTGGTATGGGCTTCAATATCGTTATG ACTGA
Upstream 100 bases:
>100_bases GCAGCACTTTCTCTTCGGTTGTGGACTTGAACACTTCCAACCATAGACAGGTGTTGCGCTTCTATTTAGAACTCAGGTCT CCTGAATTCGATGCTATTAT
Downstream 100 bases:
>100_bases GAAAATGAGCCTGAATGGCATGAAGAGTAACAGATGGGTTCAGGCTATATCAGTCATTGCCTTGATATATGTCTGCATGA CAGGCATACTGATGTTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MLNARKKIIPLLTALLVPTLLLPANAYAYGSDNVEMQEIQQTLHQYSQELLAEYHSPRTRSKLNIPLTAEEQAKEGLISK NVEVVPTIRSIQSSDDGEYLIDTDMTVNVSLDADSDTVIYVNGKRTDHLDQSWTSTHIMEFAHVGRQRGYSIISDKVIDE QDPPEYADASDKLPTEDKTPASLDENGALESEALNKAQTYAFGDNSVGVNYIKAMNYANKWTSPGYEHKMNSAYPSFGSN CANFVSQALHEGGMTLTRLWNYSTVLPDKLTTRAWMNADSNYSYMKHYSHSYDSLDNVWKAWQGSILYVDWTSNNEIDHA MFVVGVVVKDGKANPVIDQKTENRHQITLTESLQHAHEQGKNNMTWYGLQYRYD
Sequences:
>Translated_374_residues MLNARKKIIPLLTALLVPTLLLPANAYAYGSDNVEMQEIQQTLHQYSQELLAEYHSPRTRSKLNIPLTAEEQAKEGLISK NVEVVPTIRSIQSSDDGEYLIDTDMTVNVSLDADSDTVIYVNGKRTDHLDQSWTSTHIMEFAHVGRQRGYSIISDKVIDE QDPPEYADASDKLPTEDKTPASLDENGALESEALNKAQTYAFGDNSVGVNYIKAMNYANKWTSPGYEHKMNSAYPSFGSN CANFVSQALHEGGMTLTRLWNYSTVLPDKLTTRAWMNADSNYSYMKHYSHSYDSLDNVWKAWQGSILYVDWTSNNEIDHA MFVVGVVVKDGKANPVIDQKTENRHQITLTESLQHAHEQGKNNMTWYGLQYRYD >Mature_374_residues MLNARKKIIPLLTALLVPTLLLPANAYAYGSDNVEMQEIQQTLHQYSQELLAEYHSPRTRSKLNIPLTAEEQAKEGLISK NVEVVPTIRSIQSSDDGEYLIDTDMTVNVSLDADSDTVIYVNGKRTDHLDQSWTSTHIMEFAHVGRQRGYSIISDKVIDE QDPPEYADASDKLPTEDKTPASLDENGALESEALNKAQTYAFGDNSVGVNYIKAMNYANKWTSPGYEHKMNSAYPSFGSN CANFVSQALHEGGMTLTRLWNYSTVLPDKLTTRAWMNADSNYSYMKHYSHSYDSLDNVWKAWQGSILYVDWTSNNEIDHA MFVVGVVVKDGKANPVIDQKTENRHQITLTESLQHAHEQGKNNMTWYGLQYRYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42282; Mature: 42282
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNARKKIIPLLTALLVPTLLLPANAYAYGSDNVEMQEIQQTLHQYSQELLAEYHSPRTR CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC SKLNIPLTAEEQAKEGLISKNVEVVPTIRSIQSSDDGEYLIDTDMTVNVSLDADSDTVIY CEECCCCCCHHHHHCCHHHCCCEEEECHHHHCCCCCCCEEEECCEEEEEEECCCCCEEEE VNGKRTDHLDQSWTSTHIMEFAHVGRQRGYSIISDKVIDEQDPPEYADASDKLPTEDKTP EECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ASLDENGALESEALNKAQTYAFGDNSVGVNYIKAMNYANKWTSPGYEHKMNSAYPSFGSN CCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHH CANFVSQALHEGGMTLTRLWNYSTVLPDKLTTRAWMNADSNYSYMKHYSHSYDSLDNVWK HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH AWQGSILYVDWTSNNEIDHAMFVVGVVVKDGKANPVIDQKTENRHQITLTESLQHAHEQG HHCCCEEEEEECCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHCC KNNMTWYGLQYRYD CCCCEEEEEEEECC >Mature Secondary Structure MLNARKKIIPLLTALLVPTLLLPANAYAYGSDNVEMQEIQQTLHQYSQELLAEYHSPRTR CCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC SKLNIPLTAEEQAKEGLISKNVEVVPTIRSIQSSDDGEYLIDTDMTVNVSLDADSDTVIY CEECCCCCCHHHHHCCHHHCCCEEEECHHHHCCCCCCCEEEECCEEEEEEECCCCCEEEE VNGKRTDHLDQSWTSTHIMEFAHVGRQRGYSIISDKVIDEQDPPEYADASDKLPTEDKTP EECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC ASLDENGALESEALNKAQTYAFGDNSVGVNYIKAMNYANKWTSPGYEHKMNSAYPSFGSN CCCCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCHH CANFVSQALHEGGMTLTRLWNYSTVLPDKLTTRAWMNADSNYSYMKHYSHSYDSLDNVWK HHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHH AWQGSILYVDWTSNNEIDHAMFVVGVVVKDGKANPVIDQKTENRHQITLTESLQHAHEQG HHCCCEEEEEECCCCCCHHHEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHCC KNNMTWYGLQYRYD CCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA