| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691896
Identifier: 213691896
GI number: 213691896
Start: 1192686
End: 1193987
Strand: Reverse
Name: 213691896
Synonym: Blon_1008
Alternate gene names: NA
Gene position: 1193987-1192686 (Counterclockwise)
Preceding gene: 213691910
Following gene: 213691894
Centisome position: 42.15
GC content: 56.07
Gene sequence:
>1302_bases ATGGAGATTTCTGAGTCGACCTGGGCGTTCATCGCCAAACACCGCCGTGAAGATGTGCGTGATGTGGCCTTGCACGCCAA ACATGATGGCGACGTGGATGTGCCGTTCGCGCTGGAGCAGATTGCCGGCTGGCAGCGTGCTTCACTCAAGCTACCTGACT GGGCGTCCCATGATGGGCTGATTTTCCCGCCGCAAGTCCCAATGGAACAATGTTCCAGCCAGTTCACGGCTCAATACAAA GCCCGGTTAGCACAGCGATTGTTGGACGGGGAAGCAGTCGACGACGCCGACGATTCCCCGACATCCCTAGTCGATCTGAC CGGCGGTTTCGGCGTCGACTTTTCTTACATGTCCCGAGTGTTCAATCGTGCCATATATGTGGAACAACAATCCACTTTAT GTGATATCGCTCGCCATAATTTCCCAATACTCGGCCTTGGCCACGCCGAAATCATCAATGATGATTCAACAGCAGTGCTT GATACGCTTGGCCGAGCCTCCATGATCTTCCTCGATCCGGCCCGCCGTGACGATCATGGCTCGCGTACCTACGCGATTGC CGATTGCACGCCGGATGTGCTGACCCTGAAGGATACGCTGCTGGCCAAGGCACCGACGGTCATGGTCAAGCTCTCCCCCA TGCTCGACTGGCATAAGACCATTACGGATTTCGCCGGCGCGGTGCACGAGGTGCATATCGTCTCCACCGGTAATGAATGC AAGGAATTGTTGCTGGTGTTGGGGCGCGGCCGTTGCGCCTCGCCGCTCGTGGTATGCGTCAATGACGGGCAGGTGCTGTC GTACAAGGCCGGCGATAACAGCGACAATCAAACCCCTATCAGCGATTCTGCCTTAGTTGCATGCAATACCTGTAATACCG AGGATCTCCCGGCTGAGGAAAGCGCGAACGGCTTCGATTCCTCGCATTGGAAGTGCCTTTACGAACCCAACGCCTCAATC ATGAAGGCCGGGTGCTTTGATGTTCTCGAACAGCGCTTCGCCGTGCATCACATCAGCCCGAATAGCCACCTGTTCGTGGC GGCCGAACCTATTTCCGATTTTCCAGGCAGAGCATTCGTCATCGAATCCATCGCCACCATGAACAAGAGAGAACTGAAGC AGCTATTGGCCGGTCTCACGCACGCCAACATCTCCGTACGCAATTTCCCCCTAACCGTGGCCCAGCTACGCAAAAAACTC AAACTCAAGGACGGCGGCAGCACCTACCTCTTCGCCACCACCGACGCCCAAGGCCGTCACCTAGTACTGCGCACTAAAAA GCGAAAAAGTGGCTCCCTCTGA
Upstream 100 bases:
>100_bases CCATGACGCAGCATCATCACTTCATCGATCATCGGTTTTCGCCACCTCGTTCTCTTGCGATTTGCCATACTCATCTCAGC ACAACCCCTAGAATGGCGGC
Downstream 100 bases:
>100_bases CGAGGAAGCCACCAATACGTCAGCTAATCAGTCCTTGGCGATGGTCTTGCCGGCGGTCGGGCCGGAGGCAAGGTTCTGGA TCTCGGTGACTTCGAGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MEISESTWAFIAKHRREDVRDVALHAKHDGDVDVPFALEQIAGWQRASLKLPDWASHDGLIFPPQVPMEQCSSQFTAQYK ARLAQRLLDGEAVDDADDSPTSLVDLTGGFGVDFSYMSRVFNRAIYVEQQSTLCDIARHNFPILGLGHAEIINDDSTAVL DTLGRASMIFLDPARRDDHGSRTYAIADCTPDVLTLKDTLLAKAPTVMVKLSPMLDWHKTITDFAGAVHEVHIVSTGNEC KELLLVLGRGRCASPLVVCVNDGQVLSYKAGDNSDNQTPISDSALVACNTCNTEDLPAEESANGFDSSHWKCLYEPNASI MKAGCFDVLEQRFAVHHISPNSHLFVAAEPISDFPGRAFVIESIATMNKRELKQLLAGLTHANISVRNFPLTVAQLRKKL KLKDGGSTYLFATTDAQGRHLVLRTKKRKSGSL
Sequences:
>Translated_433_residues MEISESTWAFIAKHRREDVRDVALHAKHDGDVDVPFALEQIAGWQRASLKLPDWASHDGLIFPPQVPMEQCSSQFTAQYK ARLAQRLLDGEAVDDADDSPTSLVDLTGGFGVDFSYMSRVFNRAIYVEQQSTLCDIARHNFPILGLGHAEIINDDSTAVL DTLGRASMIFLDPARRDDHGSRTYAIADCTPDVLTLKDTLLAKAPTVMVKLSPMLDWHKTITDFAGAVHEVHIVSTGNEC KELLLVLGRGRCASPLVVCVNDGQVLSYKAGDNSDNQTPISDSALVACNTCNTEDLPAEESANGFDSSHWKCLYEPNASI MKAGCFDVLEQRFAVHHISPNSHLFVAAEPISDFPGRAFVIESIATMNKRELKQLLAGLTHANISVRNFPLTVAQLRKKL KLKDGGSTYLFATTDAQGRHLVLRTKKRKSGSL >Mature_433_residues MEISESTWAFIAKHRREDVRDVALHAKHDGDVDVPFALEQIAGWQRASLKLPDWASHDGLIFPPQVPMEQCSSQFTAQYK ARLAQRLLDGEAVDDADDSPTSLVDLTGGFGVDFSYMSRVFNRAIYVEQQSTLCDIARHNFPILGLGHAEIINDDSTAVL DTLGRASMIFLDPARRDDHGSRTYAIADCTPDVLTLKDTLLAKAPTVMVKLSPMLDWHKTITDFAGAVHEVHIVSTGNEC KELLLVLGRGRCASPLVVCVNDGQVLSYKAGDNSDNQTPISDSALVACNTCNTEDLPAEESANGFDSSHWKCLYEPNASI MKAGCFDVLEQRFAVHHISPNSHLFVAAEPISDFPGRAFVIESIATMNKRELKQLLAGLTHANISVRNFPLTVAQLRKKL KLKDGGSTYLFATTDAQGRHLVLRTKKRKSGSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47588; Mature: 47588
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEISESTWAFIAKHRREDVRDVALHAKHDGDVDVPFALEQIAGWQRASLKLPDWASHDGL CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCE IFPPQVPMEQCSSQFTAQYKARLAQRLLDGEAVDDADDSPTSLVDLTGGFGVDFSYMSRV EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH FNRAIYVEQQSTLCDIARHNFPILGLGHAEIINDDSTAVLDTLGRASMIFLDPARRDDHG HHHEEEEECCHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHCCCCEEEEECCCCCCCCC SRTYAIADCTPDVLTLKDTLLAKAPTVMVKLSPMLDWHKTITDFAGAVHEVHIVSTGNEC CEEEEEECCCCCCEEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHH KELLLVLGRGRCASPLVVCVNDGQVLSYKAGDNSDNQTPISDSALVACNTCNTEDLPAEE HHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SANGFDSSHWKCLYEPNASIMKAGCFDVLEQRFAVHHISPNSHLFVAAEPISDFPGRAFV CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCEEE IESIATMNKRELKQLLAGLTHANISVRNFPLTVAQLRKKLKLKDGGSTYLFATTDAQGRH HHHHHHCCHHHHHHHHHCCHHCCEEEEECCEEHHHHHHHHEECCCCCEEEEEECCCCCCE LVLRTKKRKSGSL EEEEECCCCCCCC >Mature Secondary Structure MEISESTWAFIAKHRREDVRDVALHAKHDGDVDVPFALEQIAGWQRASLKLPDWASHDGL CCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCE IFPPQVPMEQCSSQFTAQYKARLAQRLLDGEAVDDADDSPTSLVDLTGGFGVDFSYMSRV EECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH FNRAIYVEQQSTLCDIARHNFPILGLGHAEIINDDSTAVLDTLGRASMIFLDPARRDDHG HHHEEEEECCHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHCCCCEEEEECCCCCCCCC SRTYAIADCTPDVLTLKDTLLAKAPTVMVKLSPMLDWHKTITDFAGAVHEVHIVSTGNEC CEEEEEECCCCCCEEHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEEECCHHH KELLLVLGRGRCASPLVVCVNDGQVLSYKAGDNSDNQTPISDSALVACNTCNTEDLPAEE HHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCC SANGFDSSHWKCLYEPNASIMKAGCFDVLEQRFAVHHISPNSHLFVAAEPISDFPGRAFV CCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCEEE IESIATMNKRELKQLLAGLTHANISVRNFPLTVAQLRKKLKLKDGGSTYLFATTDAQGRH HHHHHHCCHHHHHHHHHCCHHCCEEEEECCEEHHHHHHHHEECCCCCEEEEEECCCCCCE LVLRTKKRKSGSL EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA