| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691908
Identifier: 213691908
GI number: 213691908
Start: 1207108
End: 1207635
Strand: Direct
Name: 213691908
Synonym: Blon_1020
Alternate gene names: NA
Gene position: 1207108-1207635 (Clockwise)
Preceding gene: 213691907
Following gene: 213691909
Centisome position: 42.61
GC content: 57.2
Gene sequence:
>528_bases GTGACCGTCCGATATACGGTTCTGGCTTGCAGCCGTAGGGCTTCTTGCAACAGGTGTAGAGAATACACCTGCTTTGCTTG TCCTTCAAATCGGCGTGTCTCGACAATTCTTCTCGATGCACCCGGTTTTCCGAAGAGCTTCAGCCGTACGGAAGAGACCT TGAGAACCCGATGGTATCAAATCGTCCGTTTCTCCAAAATCGTGAACAAGAGCATCACGGACGTGACCGAAGACGACCTC ATATTTTATCTTGCCGGCATGGGAACCGAAGGCAGACGCGGAGTGCGCAGCTGCGTCAAGGTCTTCTACCAATGGGGCAT GAAACGAGGACTCGCTCGCTGCAACCCGACGGACGAAGTGCCCACCGTCCCCGTCACCCTTCCTTCCGGCCGCATCTGCC CGGAGGAGAACATCGAACAAGGGCTCGCATCACCCAGGGACGCTGCGGCGTCGATTACGTGGCGAGGAGGATCAAGACGG CAACCGGATACCCGTCGCACAGCCTGCGCATGCCATTGCAGACCCTGA
Upstream 100 bases:
>100_bases CAGTCGGATGCTCTGCCAACTGAGCTACGCAGGAATATTCAATTTTCATCCCGTCCGGAGTTACCCGTTCAGGTGAGCTC CTGCGACTGGGCTTGAACCA
Downstream 100 bases:
>100_bases AACCGCTGGGACGCCACCGGAACCGTTGGTAGACAGGAAACCCAAACATCGGCTGCTGCCCATCACACCCATCATCGACG ATGAGCCGCCTCGTGATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Integration/Recombination/Inversion Protein; Integrase/Recombinase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MTVRYTVLACSRRASCNRCREYTCFACPSNRRVSTILLDAPGFPKSFSRTEETLRTRWYQIVRFSKIVNKSITDVTEDDL IFYLAGMGTEGRRGVRSCVKVFYQWGMKRGLARCNPTDEVPTVPVTLPSGRICPEENIEQGLASPRDAAASITWRGGSRR QPDTRRTACACHCRP
Sequences:
>Translated_175_residues MTVRYTVLACSRRASCNRCREYTCFACPSNRRVSTILLDAPGFPKSFSRTEETLRTRWYQIVRFSKIVNKSITDVTEDDL IFYLAGMGTEGRRGVRSCVKVFYQWGMKRGLARCNPTDEVPTVPVTLPSGRICPEENIEQGLASPRDAAASITWRGGSRR QPDTRRTACACHCRP >Mature_174_residues TVRYTVLACSRRASCNRCREYTCFACPSNRRVSTILLDAPGFPKSFSRTEETLRTRWYQIVRFSKIVNKSITDVTEDDLI FYLAGMGTEGRRGVRSCVKVFYQWGMKRGLARCNPTDEVPTVPVTLPSGRICPEENIEQGLASPRDAAASITWRGGSRRQ PDTRRTACACHCRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19793; Mature: 19662
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRYTVLACSRRASCNRCREYTCFACPSNRRVSTILLDAPGFPKSFSRTEETLRTRWYQ CCEEEEEEECCCCHHHHHHHCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH IVRFSKIVNKSITDVTEDDLIFYLAGMGTEGRRGVRSCVKVFYQWGMKRGLARCNPTDEV HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTVPVTLPSGRICPEENIEQGLASPRDAAASITWRGGSRRQPDTRRTACACHCRP CEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCC >Mature Secondary Structure TVRYTVLACSRRASCNRCREYTCFACPSNRRVSTILLDAPGFPKSFSRTEETLRTRWYQ CEEEEEEECCCCHHHHHHHCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH IVRFSKIVNKSITDVTEDDLIFYLAGMGTEGRRGVRSCVKVFYQWGMKRGLARCNPTDEV HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTVPVTLPSGRICPEENIEQGLASPRDAAASITWRGGSRRQPDTRRTACACHCRP CEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA