| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691909
Identifier: 213691909
GI number: 213691909
Start: 1207661
End: 1208728
Strand: Direct
Name: 213691909
Synonym: Blon_1021
Alternate gene names: NA
Gene position: 1207661-1208728 (Clockwise)
Preceding gene: 213691908
Following gene: 213691912
Centisome position: 42.63
GC content: 53.09
Gene sequence:
>1068_bases TTGGTAGACAGGAAACCCAAACATCGGCTGCTGCCCATCACACCCATCATCGACGATGAGCCGCCTCGTGATGCGCGGAA CAATGACACTCCCGTCTCCGAGTCTGACAAGCAGACGGGATCAACGATAGACACACCGATGGGGATCGGAGAACATGCCG AGGATGATGCGTCCTTGGCGGAATTATCTGCCGACGAAGCGGATGAGGTAGCCGTTCATTGGCATATCCCTTTTATCCGC ATCGCCGGCATCATGCTCATTCTGGCCATCGTAACGGGATCAGCCGCAGGCCTTGTCATGGCGAAGAAGAACTATGACCA TCAGGAGGCGCTCACGTCATGCAATCAAGCAATCAAACAAACCGGCATAGTGCGGATTGCATGGAACAAAGCGTTGAAAC AGGCGGAACCATATGCGAAGCTCCAGGATAAAGACGTGCAGGATCCCAAGTCTTTGGGACTGCTCAGCAAAATCATGCAA TATCAGCCATCGGCCTCAACGGAGAATCGCGATCCGAGTCTGACGGCCGACCGTCTCGATCGCAATCGTGCAGAAATAGG GAGAGAGAATAACCAGCTCAGAACCCAGATCAGGAACCTGCATGACACAGTTGGCACGATCAAGGCGTCACAGGAACAAC AACGGATCGACAACGCACAGAACGTACTGAGACAAACCATTGAAGACGCCGATAGGCTCTACAAAGAATCTGAGAACAAG GTCAGAGACGGCAACACCCGCGTACGGCTCAACGAGCAGATCGCCCATGCACGACTCATGATGCACGACCGTCAGAATCT TGATGCCTATAACGGAACCATTCAAGATCTCAACGAGGTCATGCAAATCGTTCGGGATTCCATGACGACTGTAGAGGATG AAGATGAAGATGTATCCGATACAGACTGTTCGGATGATTCCACACAGCCGGGCTCGGATCCTCAATCATCGAACCGACGA CCCGCACCATCATCGGAAGGTTTATCCCAGCCAGTTACGCAAGGCAATCCCACCTGGGATGTGCCCGGGCAATCGGCAAT CCCTTCATTCCCCGACCGGCTAGGATAA
Upstream 100 bases:
>100_bases ATTACGTGGCGAGGAGGATCAAGACGGCAACCGGATACCCGTCGCACAGCCTGCGCATGCCATTGCAGACCCTGAAACCG CTGGGACGCCACCGGAACCG
Downstream 100 bases:
>100_bases TGTCACCTGCAGGAATGATCAGGAGATGGTGCGGCGGTATTCGTCGAGCTTTCGGGCCGGTCAATCTCGACGACGCCGAA CGTATCAGGGAGTATGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MVDRKPKHRLLPITPIIDDEPPRDARNNDTPVSESDKQTGSTIDTPMGIGEHAEDDASLAELSADEADEVAVHWHIPFIR IAGIMLILAIVTGSAAGLVMAKKNYDHQEALTSCNQAIKQTGIVRIAWNKALKQAEPYAKLQDKDVQDPKSLGLLSKIMQ YQPSASTENRDPSLTADRLDRNRAEIGRENNQLRTQIRNLHDTVGTIKASQEQQRIDNAQNVLRQTIEDADRLYKESENK VRDGNTRVRLNEQIAHARLMMHDRQNLDAYNGTIQDLNEVMQIVRDSMTTVEDEDEDVSDTDCSDDSTQPGSDPQSSNRR PAPSSEGLSQPVTQGNPTWDVPGQSAIPSFPDRLG
Sequences:
>Translated_355_residues MVDRKPKHRLLPITPIIDDEPPRDARNNDTPVSESDKQTGSTIDTPMGIGEHAEDDASLAELSADEADEVAVHWHIPFIR IAGIMLILAIVTGSAAGLVMAKKNYDHQEALTSCNQAIKQTGIVRIAWNKALKQAEPYAKLQDKDVQDPKSLGLLSKIMQ YQPSASTENRDPSLTADRLDRNRAEIGRENNQLRTQIRNLHDTVGTIKASQEQQRIDNAQNVLRQTIEDADRLYKESENK VRDGNTRVRLNEQIAHARLMMHDRQNLDAYNGTIQDLNEVMQIVRDSMTTVEDEDEDVSDTDCSDDSTQPGSDPQSSNRR PAPSSEGLSQPVTQGNPTWDVPGQSAIPSFPDRLG >Mature_355_residues MVDRKPKHRLLPITPIIDDEPPRDARNNDTPVSESDKQTGSTIDTPMGIGEHAEDDASLAELSADEADEVAVHWHIPFIR IAGIMLILAIVTGSAAGLVMAKKNYDHQEALTSCNQAIKQTGIVRIAWNKALKQAEPYAKLQDKDVQDPKSLGLLSKIMQ YQPSASTENRDPSLTADRLDRNRAEIGRENNQLRTQIRNLHDTVGTIKASQEQQRIDNAQNVLRQTIEDADRLYKESENK VRDGNTRVRLNEQIAHARLMMHDRQNLDAYNGTIQDLNEVMQIVRDSMTTVEDEDEDVSDTDCSDDSTQPGSDPQSSNRR PAPSSEGLSQPVTQGNPTWDVPGQSAIPSFPDRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39471; Mature: 39471
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRKPKHRLLPITPIIDDEPPRDARNNDTPVSESDKQTGSTIDTPMGIGEHAEDDASLA CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHH ELSADEADEVAVHWHIPFIRIAGIMLILAIVTGSAAGLVMAKKNYDHQEALTSCNQAIKQ HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH TGIVRIAWNKALKQAEPYAKLQDKDVQDPKSLGLLSKIMQYQPSASTENRDPSLTADRLD CCCEEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RNRAEIGRENNQLRTQIRNLHDTVGTIKASQEQQRIDNAQNVLRQTIEDADRLYKESENK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VRDGNTRVRLNEQIAHARLMMHDRQNLDAYNGTIQDLNEVMQIVRDSMTTVEDEDEDVSD CCCCCCEEEEHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TDCSDDSTQPGSDPQSSNRRPAPSSEGLSQPVTQGNPTWDVPGQSAIPSFPDRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC >Mature Secondary Structure MVDRKPKHRLLPITPIIDDEPPRDARNNDTPVSESDKQTGSTIDTPMGIGEHAEDDASLA CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHH ELSADEADEVAVHWHIPFIRIAGIMLILAIVTGSAAGLVMAKKNYDHQEALTSCNQAIKQ HHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHH TGIVRIAWNKALKQAEPYAKLQDKDVQDPKSLGLLSKIMQYQPSASTENRDPSLTADRLD CCCEEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH RNRAEIGRENNQLRTQIRNLHDTVGTIKASQEQQRIDNAQNVLRQTIEDADRLYKESENK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VRDGNTRVRLNEQIAHARLMMHDRQNLDAYNGTIQDLNEVMQIVRDSMTTVEDEDEDVSD CCCCCCEEEEHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC TDCSDDSTQPGSDPQSSNRRPAPSSEGLSQPVTQGNPTWDVPGQSAIPSFPDRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA