| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691877
Identifier: 213691877
GI number: 213691877
Start: 1174192
End: 1175454
Strand: Reverse
Name: 213691877
Synonym: Blon_0988
Alternate gene names: NA
Gene position: 1175454-1174192 (Counterclockwise)
Preceding gene: 213691882
Following gene: 213691873
Centisome position: 41.5
GC content: 61.36
Gene sequence:
>1263_bases ATGGTTCGGTTTGCCTGTTTGTATAATGCGCTTATTTATCTTGGTGCCGGATGTTTTTCGGTCTACTATATGGTGGCCTA TCATGATGTGGGCCTGTCGGTGCTGCTGATCTCCATCGTCAATGTGGTGTTCGACGTCAGCGAATCGGCCAGCGAGCTGC CCACGTCCGTGCTGTTCGACCGGTGGTCCCGGGAACGGACGCTGATCATCGGCGTGTTGTGCCGCGTCGCGGGATTCATA TTGATGCTGTTCTGGTCCGCGAACTTCGCCGTGCTGTGCCTGGCCAACGTGCTGGCCGGCATCGGGGCCGCGGTCGAAAG CGGCGCGGCGTCCTCGCTGTACATCGAATACGCCCGCAAGTACGATCCCTCGCTGGGTATGAAGACCTTGGTGTCAAGAC TGTCGGCGATGATCGGTGTGTGCACGATATGCGGCGGTGCGGTCGGTGCCGTGCTGTTCCTGCTTGACTCCCAGCTGATC TGGCTGGGCGCGACGGTGTTCTACGTATTGGCGATCATCCCGCTTCTCGGTCTGATGAGGGCCGGGTCGCGCACCAAGGC CGCAGCGACGGATGGGAGCGGGACGACGGAACGGCAGGCCGAGGCGTCCGTCGAATCCGATGGATCCGCCGAGCCGGGCG AGTCCGGGACCTCGCTGACGGTGTTGGATCATGTCAGGCAGACCGTGGCGGCCGCGGCCGTGCTGCTGCGGAAGCCGGAG ATATGGAATATGGTGGTGTTCAATCTGGGTACGTTGTCGGTGCTGACGTTCTGGCAGTTGCTGCTGATGGGCCACCAGAC CGGGGTCTGGTGGCAGTTCGCCGGCCTAGTGTTCACTAATATCGCGCAGATCGTCGGCAGTCGTCTGGGTATGCTGCGGC TGCATCCACGTTCCGGCGACATTGCGATCCTCGTGCTCATCGTGTCGGCGGTGGTGCTTGCGGCCACGCCGATGCCGGCG GTGAGGATCCTGGCGTTCTTCGTGTTCTCCTGCGCGCAGATGTACGTGGCGAACACGATCTCCAGCAGCTTGCACGAGAG CATTGACGATTCGATCCGCGCGACCGCGTTCTCCGTGGGATCGCTCGTATTGATGGCCTTCACCGCGGTCGTCACCCCGC TGTGCGGCTACATCGCCGACACGTTCTCGATTTCCTGGGGTACACTGACGACGATCCCCCTGCTGGTGGCCCTCCTCATC GCCGGACTTGCGCGAAAGCCTGAATCCGACAAACGGGTAAAAGTCGATATTTCGTTGGATTGA
Upstream 100 bases:
>100_bases TTACAAACTCCAATCGTCTGGAGGATTTTGCTAAGGCTATGGGATTTAATATACATAGATCGACGTATACCGGTTCTTTG TTTATGTAAGGGAATGATTG
Downstream 100 bases:
>100_bases GACGTCAAGGGCTTGCGGACACGATGTCCGCAAGCCCTTGACGTCTATATGTCATTCATTCATGGTTGGAATGCGCTCCT CCTACGCGTGCGGTTGAATG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MVRFACLYNALIYLGAGCFSVYYMVAYHDVGLSVLLISIVNVVFDVSESASELPTSVLFDRWSRERTLIIGVLCRVAGFI LMLFWSANFAVLCLANVLAGIGAAVESGAASSLYIEYARKYDPSLGMKTLVSRLSAMIGVCTICGGAVGAVLFLLDSQLI WLGATVFYVLAIIPLLGLMRAGSRTKAAATDGSGTTERQAEASVESDGSAEPGESGTSLTVLDHVRQTVAAAAVLLRKPE IWNMVVFNLGTLSVLTFWQLLLMGHQTGVWWQFAGLVFTNIAQIVGSRLGMLRLHPRSGDIAILVLIVSAVVLAATPMPA VRILAFFVFSCAQMYVANTISSSLHESIDDSIRATAFSVGSLVLMAFTAVVTPLCGYIADTFSISWGTLTTIPLLVALLI AGLARKPESDKRVKVDISLD
Sequences:
>Translated_420_residues MVRFACLYNALIYLGAGCFSVYYMVAYHDVGLSVLLISIVNVVFDVSESASELPTSVLFDRWSRERTLIIGVLCRVAGFI LMLFWSANFAVLCLANVLAGIGAAVESGAASSLYIEYARKYDPSLGMKTLVSRLSAMIGVCTICGGAVGAVLFLLDSQLI WLGATVFYVLAIIPLLGLMRAGSRTKAAATDGSGTTERQAEASVESDGSAEPGESGTSLTVLDHVRQTVAAAAVLLRKPE IWNMVVFNLGTLSVLTFWQLLLMGHQTGVWWQFAGLVFTNIAQIVGSRLGMLRLHPRSGDIAILVLIVSAVVLAATPMPA VRILAFFVFSCAQMYVANTISSSLHESIDDSIRATAFSVGSLVLMAFTAVVTPLCGYIADTFSISWGTLTTIPLLVALLI AGLARKPESDKRVKVDISLD >Mature_420_residues MVRFACLYNALIYLGAGCFSVYYMVAYHDVGLSVLLISIVNVVFDVSESASELPTSVLFDRWSRERTLIIGVLCRVAGFI LMLFWSANFAVLCLANVLAGIGAAVESGAASSLYIEYARKYDPSLGMKTLVSRLSAMIGVCTICGGAVGAVLFLLDSQLI WLGATVFYVLAIIPLLGLMRAGSRTKAAATDGSGTTERQAEASVESDGSAEPGESGTSLTVLDHVRQTVAAAAVLLRKPE IWNMVVFNLGTLSVLTFWQLLLMGHQTGVWWQFAGLVFTNIAQIVGSRLGMLRLHPRSGDIAILVLIVSAVVLAATPMPA VRILAFFVFSCAQMYVANTISSSLHESIDDSIRATAFSVGSLVLMAFTAVVTPLCGYIADTFSISWGTLTTIPLLVALLI AGLARKPESDKRVKVDISLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44871; Mature: 44871
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRFACLYNALIYLGAGCFSVYYMVAYHDVGLSVLLISIVNVVFDVSESASELPTSVLFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RWSRERTLIIGVLCRVAGFILMLFWSANFAVLCLANVLAGIGAAVESGAASSLYIEYARK HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YDPSLGMKTLVSRLSAMIGVCTICGGAVGAVLFLLDSQLIWLGATVFYVLAIIPLLGLMR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSRTKAAATDGSGTTERQAEASVESDGSAEPGESGTSLTVLDHVRQTVAAAAVLLRKPE CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC IWNMVVFNLGTLSVLTFWQLLLMGHQTGVWWQFAGLVFTNIAQIVGSRLGMLRLHPRSGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC IAILVLIVSAVVLAATPMPAVRILAFFVFSCAQMYVANTISSSLHESIDDSIRATAFSVG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLMAFTAVVTPLCGYIADTFSISWGTLTTIPLLVALLIAGLARKPESDKRVKVDISLD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure MVRFACLYNALIYLGAGCFSVYYMVAYHDVGLSVLLISIVNVVFDVSESASELPTSVLFD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH RWSRERTLIIGVLCRVAGFILMLFWSANFAVLCLANVLAGIGAAVESGAASSLYIEYARK HHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH YDPSLGMKTLVSRLSAMIGVCTICGGAVGAVLFLLDSQLIWLGATVFYVLAIIPLLGLMR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGSRTKAAATDGSGTTERQAEASVESDGSAEPGESGTSLTVLDHVRQTVAAAAVLLRKPE CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC IWNMVVFNLGTLSVLTFWQLLLMGHQTGVWWQFAGLVFTNIAQIVGSRLGMLRLHPRSGD HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC IAILVLIVSAVVLAATPMPAVRILAFFVFSCAQMYVANTISSSLHESIDDSIRATAFSVG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVLMAFTAVVTPLCGYIADTFSISWGTLTTIPLLVALLIAGLARKPESDKRVKVDISLD HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA