Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691873

Identifier: 213691873

GI number: 213691873

Start: 1170191

End: 1170709

Strand: Reverse

Name: 213691873

Synonym: Blon_0984

Alternate gene names: NA

Gene position: 1170709-1170191 (Counterclockwise)

Preceding gene: 213691877

Following gene: 213691872

Centisome position: 41.33

GC content: 39.5

Gene sequence:

>519_bases
ATGGAAACTCCCTATAGGAGTCCTACCCTATCTAGCTTTCCGTCTAATGCTTCTCTGGAAGATTTTGAGAAAACCTCAGA
TAACGAAGATCTGAGAATTATCTCATCTCCTTCTCGGGGCGCTAATTACAAAACGTGCGCTGCAGAGGCTGTAGCTTTAC
TGCAGATTTATTCTACTACAGGATCCGGCTCGTCATCTAGTTTCACGAATCTCGGTCATTCTTGGCTTATGATCACAAAC
CTGTCTGGTTCTACGGCAGACATTGCTGGGATTAACGTTGCTGATGGTAAATCTATAACAGCAAGCACTTGGGATGAATC
CGTAGATGTCAGTAGAGAATATAAGGGTCTGTGGCTCAATCTTGATTCGAAGCTTAATTCCAATGGTATTAATCTTCAGA
ATGTTTCCATTCAATTACCCTTAAGGCAAATTGATTTAGATACAGTGAATTCTAATATTAAAAATAACGATAAATGGGGC
TATCTTAACAACTGTTCTACTTTCGCTTCAAAAATTTGA

Upstream 100 bases:

>100_bases
AAAGGAGAAATAAATAAAGAAACTCAAACAAATTGTCACTGCTCTAGTATCTGTAATATTGGCTGGAACTGTAACAGTAA
ATGCGTCGGCAGCAGAATCT

Downstream 100 bases:

>100_bases
AATTCAATTGCTAGTGACAGCAGTAAAGTTGACGCTGGAGCCATGAATACACCAGCCAGTCTAGCAAAAAGTATTACAAA
AGTTGGTGAGGCAGAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
METPYRSPTLSSFPSNASLEDFEKTSDNEDLRIISSPSRGANYKTCAAEAVALLQIYSTTGSGSSSSFTNLGHSWLMITN
LSGSTADIAGINVADGKSITASTWDESVDVSREYKGLWLNLDSKLNSNGINLQNVSIQLPLRQIDLDTVNSNIKNNDKWG
YLNNCSTFASKI

Sequences:

>Translated_172_residues
METPYRSPTLSSFPSNASLEDFEKTSDNEDLRIISSPSRGANYKTCAAEAVALLQIYSTTGSGSSSSFTNLGHSWLMITN
LSGSTADIAGINVADGKSITASTWDESVDVSREYKGLWLNLDSKLNSNGINLQNVSIQLPLRQIDLDTVNSNIKNNDKWG
YLNNCSTFASKI
>Mature_172_residues
METPYRSPTLSSFPSNASLEDFEKTSDNEDLRIISSPSRGANYKTCAAEAVALLQIYSTTGSGSSSSFTNLGHSWLMITN
LSGSTADIAGINVADGKSITASTWDESVDVSREYKGLWLNLDSKLNSNGINLQNVSIQLPLRQIDLDTVNSNIKNNDKWG
YLNNCSTFASKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18669; Mature: 18669

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPYRSPTLSSFPSNASLEDFEKTSDNEDLRIISSPSRGANYKTCAAEAVALLQIYSTT
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECC
GSGSSSSFTNLGHSWLMITNLSGSTADIAGINVADGKSITASTWDESVDVSREYKGLWLN
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEE
LDSKLNSNGINLQNVSIQLPLRQIDLDTVNSNIKNNDKWGYLNNCSTFASKI
ECCCCCCCCCEEEEEEEEECHHEECHHHHCCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
METPYRSPTLSSFPSNASLEDFEKTSDNEDLRIISSPSRGANYKTCAAEAVALLQIYSTT
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEECC
GSGSSSSFTNLGHSWLMITNLSGSTADIAGINVADGKSITASTWDESVDVSREYKGLWLN
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCCCCCCCCCCCCEEEEE
LDSKLNSNGINLQNVSIQLPLRQIDLDTVNSNIKNNDKWGYLNNCSTFASKI
ECCCCCCCCCEEEEEEEEECHHEECHHHHCCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA