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The map label for this gene is IS1086 [H]

Identifier: 213691882

GI number: 213691882

Start: 1177911

End: 1179212

Strand: Reverse

Name: IS1086 [H]

Synonym: Blon_0994

Alternate gene names: 213691882

Gene position: 1179212-1177911 (Counterclockwise)

Preceding gene: 213691883

Following gene: 213691877

Centisome position: 41.63

GC content: 67.43

Gene sequence:

>1302_bases
TTGCAACACCTGACCTACCGCAAGGAGGGTCAGGTGACCACAAGCCACCGAAACGAAGACCGTGGCGGGGAACACCGTTG
GGCGTTCAACGGCGTCGAATATCCGACGAGGAAGCTGATGTGCGAGGCGAGACGCGCCGAGTACGTGCGCCTGCTGGACG
AGGAAGGCATGAACTTCACCCAGGCCGCGCACGCGGTCGGCGTCTCGAAACGCACCGGCAAGGCGTGGCGCAACGGCAGG
ACGCGCGCCACGGGAAGGAACGAGAAACCCCTGGTGGACCGGTATCGTTCCACCATGGACAAACCCAGGACCCTCCATCC
GCGCTACCTGAGCCAGGAGGAGCGCATCCAGATCGCGGACCGTCTGTGTCTGGGCGATTCGATCCGCGCCATCGCCCGCC
TGCTGGGCCGCGACCCCGGCACGGTCGGCCGCGAGGTCGAGCGCGACGGGAATCCCGAGTCCGGCGGTTACGAGCCCTGC
CGCGCCCGGCAGAAGGCCGCGGACCGGCTCAAACGCCCCAAACCGCGCAAGGCGGCCGAGGACACGCGACTGTGGGACGA
GATCGCCGCCGGGTTGCGCAGGCATTGGAGCCCGGAGCAGATAGCCAACCGGCCGAGGCCGGACCTCCCGGATAATGGGG
ATATGCACGCGAGCGTCGAGACGATCTGCCAGCCCATCTACCTGCAGGCCAGGGGCGAACTCAGGCAGGAGCCGAAACGC
GCCATGAGGCAGGGGCGAACCGCCCGCAGACCCCGAGGCGGCCAAGGCCGCAAACCCCGTTTCCGCGAACCCATGGTCAT
GATCTCGGAGCGGCCCCCGGAGATCGAGGACCGGGCGGTCCCGGGCCACTGGGAGGGCGATCTCATCACCGGCAGCCGCA
ACAAAAGCGCCATCGGCACGCTCGTCGAGCGCACCACCAGGTTCACGATCCTGCCGCACCTGCCCGACGGGCACGACGCC
GAACACGCCCGGCAGGCCATCATCGACAAGATGCAGCACCTGCCCAAACTCCTGCGCAACAGCCTGACCTGGGACCAGGG
AGCGGAACTCGCCCTGCACAAACGGATCGGCGCCTCGCTGGAGGCCGTCCACTTCTGCGACCCGCACTCCCCGTGGCAGC
GCGGCACCAACGAGAACACCAACGGGCTCCTGCGCCAGTACTTCCCCAAAGGCACCGACCCATCCGTCTACCCGGAGGAC
CACCTCGACGCGGTCGCCGAGGAACTCAACGACCGGCCACGCAAAACCCTCGGGTTCATGAAACCAAGCGAGAAGATCAT
CGAACTGCTCGACGCCGCGTGA

Upstream 100 bases:

>100_bases
CGAGCGCCCGGCGCAACCAGACGCCGCTCACCAAGGACAAGATAGATCGACTCGTGCCATTGCCCCCGAATACTACCGGC
CCGGCGGGTTCTAGTGATCG

Downstream 100 bases:

>100_bases
TAACCTCAACAACCGACAACGTGACCATGGAAGGCCGCTCAAACCTCAGGTGTTGCAACCACCACTAGAATCCGCCTTAT
CGCCAAATCCATCAGGCTCT

Product: transcriptional regulator, Fis family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MQHLTYRKEGQVTTSHRNEDRGGEHRWAFNGVEYPTRKLMCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGR
TRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIADRLCLGDSIRAIARLLGRDPGTVGREVERDGNPESGGYEPC
RARQKAADRLKRPKPRKAAEDTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASVETICQPIYLQARGELRQEPKR
AMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRAVPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDA
EHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGASLEAVHFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPED
HLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA

Sequences:

>Translated_433_residues
MQHLTYRKEGQVTTSHRNEDRGGEHRWAFNGVEYPTRKLMCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGR
TRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIADRLCLGDSIRAIARLLGRDPGTVGREVERDGNPESGGYEPC
RARQKAADRLKRPKPRKAAEDTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASVETICQPIYLQARGELRQEPKR
AMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRAVPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDA
EHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGASLEAVHFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPED
HLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA
>Mature_433_residues
MQHLTYRKEGQVTTSHRNEDRGGEHRWAFNGVEYPTRKLMCEARRAEYVRLLDEEGMNFTQAAHAVGVSKRTGKAWRNGR
TRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIADRLCLGDSIRAIARLLGRDPGTVGREVERDGNPESGGYEPC
RARQKAADRLKRPKPRKAAEDTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASVETICQPIYLQARGELRQEPKR
AMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRAVPGHWEGDLITGSRNKSAIGTLVERTTRFTILPHLPDGHDA
EHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGASLEAVHFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPED
HLDAVAEELNDRPRKTLGFMKPSEKIIELLDAA

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786450, Length=324, Percent_Identity=43.2098765432099, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1790736, Length=324, Percent_Identity=43.2098765432099, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI1787671, Length=324, Percent_Identity=43.2098765432099, Blast_Score=220, Evalue=2e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 49539; Mature: 49539

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE ; PS01043 TRANSPOSASE_IS30

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHLTYRKEGQVTTSHRNEDRGGEHRWAFNGVEYPTRKLMCEARRAEYVRLLDEEGMNFT
CCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
QAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIAD
HHHHHHCCCHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH
RLCLGDSIRAIARLLGRDPGTVGREVERDGNPESGGYEPCRARQKAADRLKRPKPRKAAE
HHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
DTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASVETICQPIYLQARGELRQEPKR
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRAVPGHWEGDLITGSRNKSAIGT
HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
LVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGASL
HHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
EAVHFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPEDHLDAVAEELNDRPRKTLGFM
CEEEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
KPSEKIIELLDAA
CCHHHHHHHHHCC
>Mature Secondary Structure
MQHLTYRKEGQVTTSHRNEDRGGEHRWAFNGVEYPTRKLMCEARRAEYVRLLDEEGMNFT
CCCCCCCCCCCEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
QAAHAVGVSKRTGKAWRNGRTRATGRNEKPLVDRYRSTMDKPRTLHPRYLSQEERIQIAD
HHHHHHCCCHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHH
RLCLGDSIRAIARLLGRDPGTVGREVERDGNPESGGYEPCRARQKAADRLKRPKPRKAAE
HHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH
DTRLWDEIAAGLRRHWSPEQIANRPRPDLPDNGDMHASVETICQPIYLQARGELRQEPKR
HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AMRQGRTARRPRGGQGRKPRFREPMVMISERPPEIEDRAVPGHWEGDLITGSRNKSAIGT
HHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
LVERTTRFTILPHLPDGHDAEHARQAIIDKMQHLPKLLRNSLTWDQGAELALHKRIGASL
HHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC
EAVHFCDPHSPWQRGTNENTNGLLRQYFPKGTDPSVYPEDHLDAVAEELNDRPRKTLGFM
CEEEECCCCCHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
KPSEKIIELLDAA
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]