| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691869
Identifier: 213691869
GI number: 213691869
Start: 1164182
End: 1165369
Strand: Direct
Name: 213691869
Synonym: Blon_0980
Alternate gene names: NA
Gene position: 1164182-1165369 (Clockwise)
Preceding gene: 213691868
Following gene: 213691871
Centisome position: 41.1
GC content: 66.33
Gene sequence:
>1188_bases ATGTCGAACCAGATTCTACAGGTCGACGAGAACATGCTCGAGACGAAGCTGGACCGTCTCGTGTCCCGGAAGGGCGAGGA GCTGTTGAACGCGATGCTGGACGCGGAGGCCGACGAGATCACCGGGGCCGCGAGATACGAGCGTGCGTCCGGTCGGAGGG CCTACCGTGCGGGCCACTACGAGCGGAACCTGACCGTGAAGGCCGGGACGATGACGCTCAGGGTGCCGAAGCTGAAGGGC GCGGTCTTCGAGTCGGCGGTCATCGAACGCTACCGGCGTCGCGAGCAGAGCGTCGAGGAGGCGCTGATCGACATGTACCT GGCCGGCGTCAGCACGCGTCAGGTCGACGACATCAGCCGCCTGCTGTGGGGCGAGCGGATGCCCTCCCAGACGCTCTCCG ACAAGCTCAAGCGCGTGTACGAGGACATCGATCAATGGCGGAACCGTCCCCTGGCGGCCCATTCGTACCCGTACCTGTTC GTGGACGGCGTGTGGCACAAGCGCACGTGGGGCGGGTCGGTCGAGAACGTGAGCGTGCTGGTCGCCATCGGCGTGGACGA CACCGGCCACCGTGAGGTCGTCGGCGTCGCGGAGGGCATGAAGGAGGACAAGGCCAGCTGGGAGCAGTTCGTCAGGAGCA TGATCGAACGCGGTCTCAGGGGCGTGCGGCTCGTGGTCGGCGACCGGTGCGCCGGGCTCGTCTCCACCGTGAACTCGATG CTGCCGGACGCGCGCTACCAGCGGTGCATGGTCCACTTCATGCGCAACGTCCTGTCCAAGGTCAGCCACAAGCACGCGGC ATGGGCCGCGTCCGCCCTGAAGGCCGTGTTCGCCATGGAAAGCCGGCAGGCCGCGTTGGAGAAGGCCGAACAGGTCGCCA CCGAAATGGAGTCCAAGGGGCTGAAGGCCGCCGCCTCCTGCCTCAGGGAAGGCATCAGCGAGACCACGACCTACCTGCTC GACGACTATCCCGTCGAGCATCGGCGGCGGATCCGCACGAACAACATGATCGAACGGCTCAACCGCGAGATCCGCCGGCG CACCAGAGTGGTCGGCAGCTTCCCGGACGGCAGGAGCGCGCTCATGCTCGTCTGCGCCAGGATCCGCTACGTCACCGCCA ACCAATGGAGCGCACGCCGCTACCTGGACATGTCCCGGCTCGACGGCATCATGCAATCAACCGACTGA
Upstream 100 bases:
>100_bases GCGCACTTTGGTTGAGGTCTGAATGAAGGGACATGGTCCGTCGCCGGGGTACGATTTCAGTCGCCAAACATAAAACCGCT ATGGAAAGAGGCGACGAACC
Downstream 100 bases:
>100_bases AGTTGTCCTCCCGGCAACGGGCCGAACCGCTTTTGCGCAAGAATTCGGGCGTTATCCATTGCCGTTCTGGGACAGGCTGT AACGGATCGCCACCTAGGTC
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSNQILQVDENMLETKLDRLVSRKGEELLNAMLDAEADEITGAARYERASGRRAYRAGHYERNLTVKAGTMTLRVPKLKG AVFESAVIERYRRREQSVEEALIDMYLAGVSTRQVDDISRLLWGERMPSQTLSDKLKRVYEDIDQWRNRPLAAHSYPYLF VDGVWHKRTWGGSVENVSVLVAIGVDDTGHREVVGVAEGMKEDKASWEQFVRSMIERGLRGVRLVVGDRCAGLVSTVNSM LPDARYQRCMVHFMRNVLSKVSHKHAAWAASALKAVFAMESRQAALEKAEQVATEMESKGLKAAASCLREGISETTTYLL DDYPVEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGRSALMLVCARIRYVTANQWSARRYLDMSRLDGIMQSTD
Sequences:
>Translated_395_residues MSNQILQVDENMLETKLDRLVSRKGEELLNAMLDAEADEITGAARYERASGRRAYRAGHYERNLTVKAGTMTLRVPKLKG AVFESAVIERYRRREQSVEEALIDMYLAGVSTRQVDDISRLLWGERMPSQTLSDKLKRVYEDIDQWRNRPLAAHSYPYLF VDGVWHKRTWGGSVENVSVLVAIGVDDTGHREVVGVAEGMKEDKASWEQFVRSMIERGLRGVRLVVGDRCAGLVSTVNSM LPDARYQRCMVHFMRNVLSKVSHKHAAWAASALKAVFAMESRQAALEKAEQVATEMESKGLKAAASCLREGISETTTYLL DDYPVEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGRSALMLVCARIRYVTANQWSARRYLDMSRLDGIMQSTD >Mature_394_residues SNQILQVDENMLETKLDRLVSRKGEELLNAMLDAEADEITGAARYERASGRRAYRAGHYERNLTVKAGTMTLRVPKLKGA VFESAVIERYRRREQSVEEALIDMYLAGVSTRQVDDISRLLWGERMPSQTLSDKLKRVYEDIDQWRNRPLAAHSYPYLFV DGVWHKRTWGGSVENVSVLVAIGVDDTGHREVVGVAEGMKEDKASWEQFVRSMIERGLRGVRLVVGDRCAGLVSTVNSML PDARYQRCMVHFMRNVLSKVSHKHAAWAASALKAVFAMESRQAALEKAEQVATEMESKGLKAAASCLREGISETTTYLLD DYPVEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGRSALMLVCARIRYVTANQWSARRYLDMSRLDGIMQSTD
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45021; Mature: 44890
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQILQVDENMLETKLDRLVSRKGEELLNAMLDAEADEITGAARYERASGRRAYRAGHY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCC ERNLTVKAGTMTLRVPKLKGAVFESAVIERYRRREQSVEEALIDMYLAGVSTRQVDDISR CCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLWGERMPSQTLSDKLKRVYEDIDQWRNRPLAAHSYPYLFVDGVWHKRTWGGSVENVSVL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE VAIGVDDTGHREVVGVAEGMKEDKASWEQFVRSMIERGLRGVRLVVGDRCAGLVSTVNSM EEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH LPDARYQRCMVHFMRNVLSKVSHKHAAWAASALKAVFAMESRQAALEKAEQVATEMESKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LKAAASCLREGISETTTYLLDDYPVEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGRSA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LMLVCARIRYVTANQWSARRYLDMSRLDGIMQSTD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SNQILQVDENMLETKLDRLVSRKGEELLNAMLDAEADEITGAARYERASGRRAYRAGHY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCC ERNLTVKAGTMTLRVPKLKGAVFESAVIERYRRREQSVEEALIDMYLAGVSTRQVDDISR CCCEEEEECEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LLWGERMPSQTLSDKLKRVYEDIDQWRNRPLAAHSYPYLFVDGVWHKRTWGGSVENVSVL HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE VAIGVDDTGHREVVGVAEGMKEDKASWEQFVRSMIERGLRGVRLVVGDRCAGLVSTVNSM EEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH LPDARYQRCMVHFMRNVLSKVSHKHAAWAASALKAVFAMESRQAALEKAEQVATEMESKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LKAAASCLREGISETTTYLLDDYPVEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGRSA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LMLVCARIRYVTANQWSARRYLDMSRLDGIMQSTD HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7768811; 11481430 [H]