| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691868
Identifier: 213691868
GI number: 213691868
Start: 1161434
End: 1162741
Strand: Direct
Name: 213691868
Synonym: Blon_0978
Alternate gene names: NA
Gene position: 1161434-1162741 (Clockwise)
Preceding gene: 213691867
Following gene: 213691869
Centisome position: 41.0
GC content: 62.23
Gene sequence:
>1308_bases ATGAGTAATTCGTTAAAGCTCGTTTCTGCTCCTGTGCGCGAAAGCAGGTTGTGGGATATCCCAGGTTACGTGCCATGGTT CACGGCGGACAGCGCGACGGCCATCGGCGTGGCCCTGCGGTATCTGGCGGTCTCTCTGATCGGATACAAGCTCACCGGAT CGACCACAGCAGCGGGTTGGTTGGGCTCGCTGGCCGCGATCGCACAGCAGGCGGCCGCCGTGTTCGGCGGGACATTCGCC GACCGTCACGATCGCAAGACACTGATCATCGTGAACGCGACAGCGGGCGTCATCTGTTGGGGGTCAGTCGCTGCGCTGCT CATGGCCGGCAAGCTGGTCTTCCCCGTGCTGCTTGCCATCGCGGTGTTCGAGTCTGCGGTCAACGGGTTTCTCGGCCCCG CCTCGGATGCGATGCTCAAATCCATCGTCGATATTCGCTCATATCCGAAAGCGCGCAGTCTCAACGAAGGCCGTGACGCG ACCATCAACATGGCCGGCAGCCCAGTCGGCGGCCTGCTGTACGGCATCGCCCCGTGGTTGCCGTTCCTGTCGGCTGCGGT CATGTACCTGCTGGCAGGCGTGGCTGCGACACGTATCCGAGTCGGCGGAAATCCGCGGAACGGCAGCGATAGCGGCAACG GCGATAGCGACGATGACGGTGGGAAAGCGGGCGGCGCGTCATTTTTCCGTGATTTCGCCGAAGGATGGTCGTGGTCGCTG CACCGCAGGATGCTGGTGTTGACGATGGTGTCGTCCGCGCTGGCGAATTTCGGGGTCAATGGCTTCCAGTATGCGATTCA GCTGCATCTGATGCGCACCGGCGTGAACGCGACGCTCATCGGATTCGTGAATACGGGCGTATTCCTCGCGATGCTGGCGG GTGCGTTCATCGCCGGACGGATCAGCGATACCGCACCGGTCGGGCCGGTGACATGCTGCGGATTCGTGTTCATCTGCATC GCTTCGCTGCCGATGCTGCTGACCGACAACTACTGGGTGCTGCTTATCGCCAACGCCGTGATGTGCCTGCCGTTCCCGAT CATCAACGCGTTGCAGCTCGGGTTCATTTTCGGTAAGACGCCCGACACGATGCAGGGGCGTATCACCGTGACGCTTACCG TACCGGCCCAGGCACTGTCCGCGTTCTGCTCAGCGACGGCCGGAAGTCTGCTGCCCGCTTTCGGATTCAGCGGGACTATG CTGGTGTTCTGGGCGGTGATGCTCGTCAGTATGCTGCTAATCGTCAGTTCGCGCAGCCTGCGCACCATTCCACGCGCCGA CCAGTGGGATCGCACACCGCTGGAGTAG
Upstream 100 bases:
>100_bases ATATGATTATGCTTGGCATACTGAGCAAGTTTGTAAAGAACCAGTGCCGCCTAATCTTCTGTAGGATTCCAGTACTGGTA GGGTAAGGATAAATTATTAG
Downstream 100 bases:
>100_bases CCGCGGACGGCCACCAACCATGGGGACTATGCACCGCTGCGCGCTGCTCTCCGCACACGTCTTCCATTCCGCAAACCGGC TGCGCTGACAGGACGATGAG
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Transporter
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSNSLKLVSAPVRESRLWDIPGYVPWFTADSATAIGVALRYLAVSLIGYKLTGSTTAAGWLGSLAAIAQQAAAVFGGTFA DRHDRKTLIIVNATAGVICWGSVAALLMAGKLVFPVLLAIAVFESAVNGFLGPASDAMLKSIVDIRSYPKARSLNEGRDA TINMAGSPVGGLLYGIAPWLPFLSAAVMYLLAGVAATRIRVGGNPRNGSDSGNGDSDDDGGKAGGASFFRDFAEGWSWSL HRRMLVLTMVSSALANFGVNGFQYAIQLHLMRTGVNATLIGFVNTGVFLAMLAGAFIAGRISDTAPVGPVTCCGFVFICI ASLPMLLTDNYWVLLIANAVMCLPFPIINALQLGFIFGKTPDTMQGRITVTLTVPAQALSAFCSATAGSLLPAFGFSGTM LVFWAVMLVSMLLIVSSRSLRTIPRADQWDRTPLE
Sequences:
>Translated_435_residues MSNSLKLVSAPVRESRLWDIPGYVPWFTADSATAIGVALRYLAVSLIGYKLTGSTTAAGWLGSLAAIAQQAAAVFGGTFA DRHDRKTLIIVNATAGVICWGSVAALLMAGKLVFPVLLAIAVFESAVNGFLGPASDAMLKSIVDIRSYPKARSLNEGRDA TINMAGSPVGGLLYGIAPWLPFLSAAVMYLLAGVAATRIRVGGNPRNGSDSGNGDSDDDGGKAGGASFFRDFAEGWSWSL HRRMLVLTMVSSALANFGVNGFQYAIQLHLMRTGVNATLIGFVNTGVFLAMLAGAFIAGRISDTAPVGPVTCCGFVFICI ASLPMLLTDNYWVLLIANAVMCLPFPIINALQLGFIFGKTPDTMQGRITVTLTVPAQALSAFCSATAGSLLPAFGFSGTM LVFWAVMLVSMLLIVSSRSLRTIPRADQWDRTPLE >Mature_434_residues SNSLKLVSAPVRESRLWDIPGYVPWFTADSATAIGVALRYLAVSLIGYKLTGSTTAAGWLGSLAAIAQQAAAVFGGTFAD RHDRKTLIIVNATAGVICWGSVAALLMAGKLVFPVLLAIAVFESAVNGFLGPASDAMLKSIVDIRSYPKARSLNEGRDAT INMAGSPVGGLLYGIAPWLPFLSAAVMYLLAGVAATRIRVGGNPRNGSDSGNGDSDDDGGKAGGASFFRDFAEGWSWSLH RRMLVLTMVSSALANFGVNGFQYAIQLHLMRTGVNATLIGFVNTGVFLAMLAGAFIAGRISDTAPVGPVTCCGFVFICIA SLPMLLTDNYWVLLIANAVMCLPFPIINALQLGFIFGKTPDTMQGRITVTLTVPAQALSAFCSATAGSLLPAFGFSGTML VFWAVMLVSMLLIVSSRSLRTIPRADQWDRTPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45823; Mature: 45692
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSLKLVSAPVRESRLWDIPGYVPWFTADSATAIGVALRYLAVSLIGYKLTGSTTAAGW CCCCCEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHH LGSLAAIAQQAAAVFGGTFADRHDRKTLIIVNATAGVICWGSVAALLMAGKLVFPVLLAI HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AVFESAVNGFLGPASDAMLKSIVDIRSYPKARSLNEGRDATINMAGSPVGGLLYGIAPWL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH PFLSAAVMYLLAGVAATRIRVGGNPRNGSDSGNGDSDDDGGKAGGASFFRDFAEGWSWSL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH HRRMLVLTMVSSALANFGVNGFQYAIQLHLMRTGVNATLIGFVNTGVFLAMLAGAFIAGR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC ISDTAPVGPVTCCGFVFICIASLPMLLTDNYWVLLIANAVMCLPFPIINALQLGFIFGKT CCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC PDTMQGRITVTLTVPAQALSAFCSATAGSLLPAFGFSGTMLVFWAVMLVSMLLIVSSRSL CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC RTIPRADQWDRTPLE CCCCCCCCCCCCCCC >Mature Secondary Structure SNSLKLVSAPVRESRLWDIPGYVPWFTADSATAIGVALRYLAVSLIGYKLTGSTTAAGW CCCCEEEECCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHH LGSLAAIAQQAAAVFGGTFADRHDRKTLIIVNATAGVICWGSVAALLMAGKLVFPVLLAI HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH AVFESAVNGFLGPASDAMLKSIVDIRSYPKARSLNEGRDATINMAGSPVGGLLYGIAPWL HHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH PFLSAAVMYLLAGVAATRIRVGGNPRNGSDSGNGDSDDDGGKAGGASFFRDFAEGWSWSL HHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHH HRRMLVLTMVSSALANFGVNGFQYAIQLHLMRTGVNATLIGFVNTGVFLAMLAGAFIAGR HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCC ISDTAPVGPVTCCGFVFICIASLPMLLTDNYWVLLIANAVMCLPFPIINALQLGFIFGKT CCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCC PDTMQGRITVTLTVPAQALSAFCSATAGSLLPAFGFSGTMLVFWAVMLVSMLLIVSSRSL CCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC RTIPRADQWDRTPLE CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA