Click here to switch to the map view.

The map label for this gene is ybhL [H]

Identifier: 213691829

GI number: 213691829

Start: 1108381

End: 1109064

Strand: Direct

Name: ybhL [H]

Synonym: Blon_0938

Alternate gene names: 213691829

Gene position: 1108381-1109064 (Clockwise)

Preceding gene: 213691826

Following gene: 213691830

Centisome position: 39.13

GC content: 60.82

Gene sequence:

>684_bases
ATGATCTACAACTACGAGGAGGCCCGCCGCGTCTCCGTAGCCAAGGTGTACGGCGAGATGACCATTGGCATCCTCGTCAC
CGCCGTGGTCGCCGTGCTCGGCCAGATCACCGGAGCCTACTACAGCTTCCTCATGGCCACCGGCATGGTGGGCCTCATCG
GCCTGTGCGTGGTGCAGATTGCCCTGGCCGTGGTGCTCGGCATGCGCGTCACCAAGATGAAGTCGGCCACTGCGCGCGTC
ATGTTATATATGTACGCCGCATTGATGGGCTTCACCTTGAGCTCGATCTTCATGGTCTACGACCTCGGCTCGATCGGCGT
GGCGCTCGGTGTCACCGCCGCGTTCTTCTTCGCTCTGACCATGTTCGGCATGACTACCAAGTTCGACATGCTCAAGGCCG
GCCCGATCCTGATGATCGGCCTGATCGTGCTCATCATCTCGCAGATCGTGCTCGCCTTCGTGCAGGTCGACGGCATGACC
AAGATCGTCTGCGCCATCGGCCTGATCCTGTTCGCCGGCATGGCCATCTACGACGCGCAGTCCACGCGCGCGCTGCTGAC
CGAGTACGAGGCCCAGGGCCCGGAAATGGTCAAGAAGATCTCCATCCTGTGTGCCCTGAACCTGTACCTCGACTTCGTGA
ACATGTTCCTGTACATCCTGCAGCTGCTCGGCAACAGGGACTAG

Upstream 100 bases:

>100_bases
CCAGAACTACTATGCCCAGCCGCAGGGTGCCCCCACCTACCAGTACGCGCCGCAGGATGCGGCCGGTGCCGGCGCGGGTG
CCGCCACCATCAACACGACG

Downstream 100 bases:

>100_bases
CCTCGCCAGCCGATTGGTGGGCGGCATGTAGCCTGCTCGTCAAACGTCACAGCCCGACCACATTGTGGCCGGGCTTTTTC
ATGTCTGTCACATTCGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MIYNYEEARRVSVAKVYGEMTIGILVTAVVAVLGQITGAYYSFLMATGMVGLIGLCVVQIALAVVLGMRVTKMKSATARV
MLYMYAALMGFTLSSIFMVYDLGSIGVALGVTAAFFFALTMFGMTTKFDMLKAGPILMIGLIVLIISQIVLAFVQVDGMT
KIVCAIGLILFAGMAIYDAQSTRALLTEYEAQGPEMVKKISILCALNLYLDFVNMFLYILQLLGNRD

Sequences:

>Translated_227_residues
MIYNYEEARRVSVAKVYGEMTIGILVTAVVAVLGQITGAYYSFLMATGMVGLIGLCVVQIALAVVLGMRVTKMKSATARV
MLYMYAALMGFTLSSIFMVYDLGSIGVALGVTAAFFFALTMFGMTTKFDMLKAGPILMIGLIVLIISQIVLAFVQVDGMT
KIVCAIGLILFAGMAIYDAQSTRALLTEYEAQGPEMVKKISILCALNLYLDFVNMFLYILQLLGNRD
>Mature_227_residues
MIYNYEEARRVSVAKVYGEMTIGILVTAVVAVLGQITGAYYSFLMATGMVGLIGLCVVQIALAVVLGMRVTKMKSATARV
MLYMYAALMGFTLSSIFMVYDLGSIGVALGVTAAFFFALTMFGMTTKFDMLKAGPILMIGLIVLIISQIVLAFVQVDGMT
KIVCAIGLILFAGMAIYDAQSTRALLTEYEAQGPEMVKKISILCALNLYLDFVNMFLYILQLLGNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Escherichia coli, GI1787004, Length=213, Percent_Identity=38.4976525821596, Blast_Score=139, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24653221, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24653223, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45551091, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17647735, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24653225, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24653227, Length=157, Percent_Identity=33.7579617834395, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24656; Mature: 24656

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.9 %Met     (Mature Protein)
9.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYNYEEARRVSVAKVYGEMTIGILVTAVVAVLGQITGAYYSFLMATGMVGLIGLCVVQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVVLGMRVTKMKSATARVMLYMYAALMGFTLSSIFMVYDLGSIGVALGVTAAFFFALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGMTTKFDMLKAGPILMIGLIVLIISQIVLAFVQVDGMTKIVCAIGLILFAGMAIYDAQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCH
STRALLTEYEAQGPEMVKKISILCALNLYLDFVNMFLYILQLLGNRD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIYNYEEARRVSVAKVYGEMTIGILVTAVVAVLGQITGAYYSFLMATGMVGLIGLCVVQI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAVVLGMRVTKMKSATARVMLYMYAALMGFTLSSIFMVYDLGSIGVALGVTAAFFFALT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFGMTTKFDMLKAGPILMIGLIVLIISQIVLAFVQVDGMTKIVCAIGLILFAGMAIYDAQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCH
STRALLTEYEAQGPEMVKKISILCALNLYLDFVNMFLYILQLLGNRD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]