| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691826
Identifier: 213691826
GI number: 213691826
Start: 1104423
End: 1104917
Strand: Direct
Name: 213691826
Synonym: Blon_0934
Alternate gene names: NA
Gene position: 1104423-1104917 (Clockwise)
Preceding gene: 213691825
Following gene: 213691829
Centisome position: 38.99
GC content: 48.28
Gene sequence:
>495_bases TTGATGACCGACGTTTCCATGCAGCGTATTTTGCTTGATACCAATGTACTGTTGGACTATTTGCTCCATCGCGATGATCA CGCCAAGATGGCGGAAGCGGTTATGGAACTTGGCGCGAAGAACAACGTTACGTTGTTGTGCGCGTCATTGTCGCTGAAGG ATATCGCATACCTATTATCATCGGCGATTCGTAGGGAATTCAAACCGAATGAATCGGAAGTGGAGAATTTCACTCGCAAC TTTCTGTCGTCACGGGTGCCATGGCGTTGTATCGAGCAGGTGAAGGAGATGTGTGACATTGTCGCTGTCGATGAGTCGAC ATGTGATAAGGCTTTTTCCCTGCAAAAACGGCATCGGGATTTTGAAGATGATCTGATCATCGTTGCCGCGCAACAATCCG GTGCCAACTGTGTGGTCACATCGGATGCCGAATTAATCAGTCATTTTCCCGAATATTGCAAAACACCGGCTGAAATCGTG GCGGCGCTGGAATAA
Upstream 100 bases:
>100_bases CAGAAGACACCGACCTCATGGAAGGCCTTACCTACAAGCAGTTCCGCGACAAAATGTACGACGAGCAACTTGATACGTAT TACAACATGAAGAGGGCCGA
Downstream 100 bases:
>100_bases ATGAGCGTGTGGCTCCCCTCATGGAGGGGAGCCACCAATGATGTGCCGGCTACCGTAGCCTACTGCGCCTGTAGACGGAA CTGCTTCCAGATGTCGCTGA
Product: PilT protein domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MMTDVSMQRILLDTNVLLDYLLHRDDHAKMAEAVMELGAKNNVTLLCASLSLKDIAYLLSSAIRREFKPNESEVENFTRN FLSSRVPWRCIEQVKEMCDIVAVDESTCDKAFSLQKRHRDFEDDLIIVAAQQSGANCVVTSDAELISHFPEYCKTPAEIV AALE
Sequences:
>Translated_164_residues MMTDVSMQRILLDTNVLLDYLLHRDDHAKMAEAVMELGAKNNVTLLCASLSLKDIAYLLSSAIRREFKPNESEVENFTRN FLSSRVPWRCIEQVKEMCDIVAVDESTCDKAFSLQKRHRDFEDDLIIVAAQQSGANCVVTSDAELISHFPEYCKTPAEIV AALE >Mature_164_residues MMTDVSMQRILLDTNVLLDYLLHRDDHAKMAEAVMELGAKNNVTLLCASLSLKDIAYLLSSAIRREFKPNESEVENFTRN FLSSRVPWRCIEQVKEMCDIVAVDESTCDKAFSLQKRHRDFEDDLIIVAAQQSGANCVVTSDAELISHFPEYCKTPAEIV AALE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18529; Mature: 18529
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDVSMQRILLDTNVLLDYLLHRDDHAKMAEAVMELGAKNNVTLLCASLSLKDIAYLLS CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH SAIRREFKPNESEVENFTRNFLSSRVPWRCIEQVKEMCDIVAVDESTCDKAFSLQKRHRD HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC FEDDLIIVAAQQSGANCVVTSDAELISHFPEYCKTPAEIVAALE CCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MMTDVSMQRILLDTNVLLDYLLHRDDHAKMAEAVMELGAKNNVTLLCASLSLKDIAYLLS CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH SAIRREFKPNESEVENFTRNFLSSRVPWRCIEQVKEMCDIVAVDESTCDKAFSLQKRHRD HHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC FEDDLIIVAAQQSGANCVVTSDAELISHFPEYCKTPAEIVAALE CCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA