| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691830
Identifier: 213691830
GI number: 213691830
Start: 1109204
End: 1110220
Strand: Direct
Name: 213691830
Synonym: Blon_0939
Alternate gene names: NA
Gene position: 1109204-1110220 (Clockwise)
Preceding gene: 213691829
Following gene: 213691832
Centisome position: 39.16
GC content: 63.13
Gene sequence:
>1017_bases ATGCTGAGCCTGTTGTTGACCGCGCTGATCTGGGGTTTTGCGTTCGTGGCGCAGGTCCAGGGCATGGATTTGATGTCGCC GATGTTCTTCAACGCCACGCGCTTCACGCTGGGAGCACTGTCTTTGGTGCCGATTCTGCTGTGGCAGCGTGGCCGGGGGA GCGCGGATAAGGGCGATACAGCCGGGGTCGATGTCGTTGGGACCGAGGCATCCAGGGCCGTCTCCACAGATGCCGCATCG AACGGTGCATCCGACGTCGTTACCATCACCGGTGCCAAGCTGAATGCGAACAAGCCCGATTCGGCCGTGGCGCGATTGCT CGCCAACCCGGTGGTCATTTCCGTGATCTGCGGCATCGTGCTGTTCACCGCCAGCACCCTGCAGCAGTATGGCATTCTGT ACGGCAAATCGGCCGGCCGTGCGGGATTCCTGACCGCCATGTACATCGTGATGGTGCCGTTGCTGGCCTACGTGTTCCTG CGCCGGCGCATCGGCATGCTGGTGTTCGTGGCCGTGGCGCTGTCCATCGCCGGCTTCTATCTGCTGTGCATCACCGATGG TTTCGGTTCGATCGGCCTGGCGGATATCCTGCTCGTGTTCACGGCCGTGCTGTTCGCCGTGCATATTCTGGTGATCGATA CTTTGGGCGGCACCATGGACGCCATCAAGCTTTCATTCGGCCAGTTCTGCACCACCGCCGTGCTGAGCTGGGCGGGTTCG CTGATCGAAGGCTCGGTCGACTGGGCCGGCGCTGCCCATTCCTGGATTCCGATTCTGTACGCCGGCATCGGCTCGGTGGG CATCGCGTACACCTTGCAGGTGGTCGGCCAGCAATGGGTGCCACCGACGCGAGCCAGCCTGCTGATGAGCCTCGAATCGT TCTTCTCGGCGGTAGGCGGTGCGTTGCTTCTCGGTGAAGTGATGACCCCGCGCGGCAACCTCGGCTGCGCCCTCATCTTC CTCGGCACCCTGCTGGCCCAAGCGCCGGCCAGGCTGCCGAAGTGGCTGCAACGGTGA
Upstream 100 bases:
>100_bases TCAAACGTCACAGCCCGACCACATTGTGGCCGGGCTTTTTCATGTCTGTCACATTCGCACGTTAGGCTGTCTCCCCGTGA AAAGACGAGAACTCGTAGGC
Downstream 100 bases:
>100_bases ATGAATCGGCCGCAGGCCGATTCCATAGCACCTCAGTCCGAGGTCTTAGGCGCTTCACCCACTTGCGGCGCGCCGTTGAT GTCGCGGTGGATGTTCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLSLLLTALIWGFAFVAQVQGMDLMSPMFFNATRFTLGALSLVPILLWQRGRGSADKGDTAGVDVVGTEASRAVSTDAAS NGASDVVTITGAKLNANKPDSAVARLLANPVVISVICGIVLFTASTLQQYGILYGKSAGRAGFLTAMYIVMVPLLAYVFL RRRIGMLVFVAVALSIAGFYLLCITDGFGSIGLADILLVFTAVLFAVHILVIDTLGGTMDAIKLSFGQFCTTAVLSWAGS LIEGSVDWAGAAHSWIPILYAGIGSVGIAYTLQVVGQQWVPPTRASLLMSLESFFSAVGGALLLGEVMTPRGNLGCALIF LGTLLAQAPARLPKWLQR
Sequences:
>Translated_338_residues MLSLLLTALIWGFAFVAQVQGMDLMSPMFFNATRFTLGALSLVPILLWQRGRGSADKGDTAGVDVVGTEASRAVSTDAAS NGASDVVTITGAKLNANKPDSAVARLLANPVVISVICGIVLFTASTLQQYGILYGKSAGRAGFLTAMYIVMVPLLAYVFL RRRIGMLVFVAVALSIAGFYLLCITDGFGSIGLADILLVFTAVLFAVHILVIDTLGGTMDAIKLSFGQFCTTAVLSWAGS LIEGSVDWAGAAHSWIPILYAGIGSVGIAYTLQVVGQQWVPPTRASLLMSLESFFSAVGGALLLGEVMTPRGNLGCALIF LGTLLAQAPARLPKWLQR >Mature_338_residues MLSLLLTALIWGFAFVAQVQGMDLMSPMFFNATRFTLGALSLVPILLWQRGRGSADKGDTAGVDVVGTEASRAVSTDAAS NGASDVVTITGAKLNANKPDSAVARLLANPVVISVICGIVLFTASTLQQYGILYGKSAGRAGFLTAMYIVMVPLLAYVFL RRRIGMLVFVAVALSIAGFYLLCITDGFGSIGLADILLVFTAVLFAVHILVIDTLGGTMDAIKLSFGQFCTTAVLSWAGS LIEGSVDWAGAAHSWIPILYAGIGSVGIAYTLQVVGQQWVPPTRASLLMSLESFFSAVGGALLLGEVMTPRGNLGCALIF LGTLLAQAPARLPKWLQR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35501; Mature: 35501
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLLLTALIWGFAFVAQVQGMDLMSPMFFNATRFTLGALSLVPILLWQRGRGSADKGDT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGVDVVGTEASRAVSTDAASNGASDVVTITGAKLNANKPDSAVARLLANPVVISVICGIV CCCEEECCCHHHHHCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCHHHHHHHHHHH LFTASTLQQYGILYGKSAGRAGFLTAMYIVMVPLLAYVFLRRRIGMLVFVAVALSIAGFY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLCITDGFGSIGLADILLVFTAVLFAVHILVIDTLGGTMDAIKLSFGQFCTTAVLSWAGS HHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LIEGSVDWAGAAHSWIPILYAGIGSVGIAYTLQVVGQQWVPPTRASLLMSLESFFSAVGG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALLLGEVMTPRGNLGCALIFLGTLLAQAPARLPKWLQR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLSLLLTALIWGFAFVAQVQGMDLMSPMFFNATRFTLGALSLVPILLWQRGRGSADKGDT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AGVDVVGTEASRAVSTDAASNGASDVVTITGAKLNANKPDSAVARLLANPVVISVICGIV CCCEEECCCHHHHHCCCCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCHHHHHHHHHHH LFTASTLQQYGILYGKSAGRAGFLTAMYIVMVPLLAYVFLRRRIGMLVFVAVALSIAGFY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLCITDGFGSIGLADILLVFTAVLFAVHILVIDTLGGTMDAIKLSFGQFCTTAVLSWAGS HHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH LIEGSVDWAGAAHSWIPILYAGIGSVGIAYTLQVVGQQWVPPTRASLLMSLESFFSAVGG HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALLLGEVMTPRGNLGCALIFLGTLLAQAPARLPKWLQR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA