| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691807
Identifier: 213691807
GI number: 213691807
Start: 1081194
End: 1082600
Strand: Reverse
Name: 213691807
Synonym: Blon_0915
Alternate gene names: NA
Gene position: 1082600-1081194 (Counterclockwise)
Preceding gene: 213691818
Following gene: 213691793
Centisome position: 38.22
GC content: 40.44
Gene sequence:
>1407_bases ATGCAATATGTTTACGACATCGTTAAATCAAACATCAAATATGCCTCATCCGATTTCTTGAGTTTTAGAATCATTTTTAT GGTATATCTAAATAATCTTTTACATAAGATCGCCATCGTGCGTATTACGGAGTTGGATTCAGCATTACGTATTATGTGTT TCAATACACTGCTCAATAACATAGGTTCCGTTGCAATGGTATCGACGTGGTCGGTATATGTTACTGGCATTTTGAAATTT AGTACGTTATGGCTAACCGTGAGCGGATGTGCAATGGCTGCGGGAATGATGATCGGCTCTGCATGCTGCGGTACGATTAC CGATCGTTTGGAACCACGATCTGTTATTTGTGCATCTAATATTTGCTTCGGCATGTGCATGGCTTTGTTATGCTTTATTA CTGATCCTGCAGCGATCACAATTTTACTTGCGATGTCCGGATTATCATCTTCATTCTATCATCCGGCTAGAAGCATTTTG ATAGTACGGTATACACCGTCCGACGATATTGCTACAACACGATCAGTTACTGCGTCATACGGTTATCTTGGCACGATTCT TGGTACGATTGGTTCTTTGCTTGCATTGTCGGGGAATACGCGTTCTTGGTACATCGTTGCCATTGCTGTAAATGCTATAA GCAGTTTTTTAGTGTCGGTAAGCGCTTTACGACTGCCTAGGATCCGTGATCATTCAGAGAATAAATCTGTTCGCAATGCA TTTTATTGGTTACGTAAATCTTTTAACTCTATTCGTAATATCAATTTCAAAATGCTGCATCTTAATGCTCAAGGTGCTAT GCGTGATTCCCGGTTCATCATGACCTGTATCCTGATGAATATTCCCGTATTGGCTTTGTACGCATTTAATACTGGCATGC CAGTATGGCTGGTAAAGTTCACTGCATTTCCAACAGTTTTAGTTGGAGTTCATAAGGCAATGGTAAATCTCACCGGCACG ATATTGCATACCGTTTTAACGCGTAAAAATGCAACCTTCTTGGAAGGTGTTAAGGATTACGAATGTGCTGCTTTAATCCA GTCACTCGCAGTAGTATTGGTTCCGGTCTCTTTATTCCTATCTCAATATGGATACGAAATTGCTGCTATTTTCGTTTTTT GTGTCATCACTGCTCTGCTAGCGTTGACTGAAATTGCTATGAATGGCGCGGCTTGGACGGTATCATACGCTTTACGTCGT CAAGGAAAGCAAGGAGAATACGAAGCGTCAAGTAATTTTATCGACGGCGCTTTCGGTATTTTATATCCTTATATTACTAC ACCATTATGCTCTTCATTTTCCATGATAGGATGGTGGATCGTTGGTTCGATAAGTGCAGTTGGTGTAATAATTATGCGCC TATTTATCAAATCTCCATCAACCAATAACAAAAAGCAGGTGGGTTGA
Upstream 100 bases:
>100_bases AATGCGAGATGCAAGTAACGTAATTTTCTTATCTATGCAAGCATGAAGGGTGTACTTATTCGGAGCACTGTATTCCACTA ATGTTTGGGGTCCGTGATGA
Downstream 100 bases:
>100_bases CTCATCTCTCGATGAGATCAATTAAGTGTGAAATAGATGCTATGAAATGGCCTCTATTATGAGGTCTATGGGCGTGGAAG GTTGGACGTTTGAGCATCCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MQYVYDIVKSNIKYASSDFLSFRIIFMVYLNNLLHKIAIVRITELDSALRIMCFNTLLNNIGSVAMVSTWSVYVTGILKF STLWLTVSGCAMAAGMMIGSACCGTITDRLEPRSVICASNICFGMCMALLCFITDPAAITILLAMSGLSSSFYHPARSIL IVRYTPSDDIATTRSVTASYGYLGTILGTIGSLLALSGNTRSWYIVAIAVNAISSFLVSVSALRLPRIRDHSENKSVRNA FYWLRKSFNSIRNINFKMLHLNAQGAMRDSRFIMTCILMNIPVLALYAFNTGMPVWLVKFTAFPTVLVGVHKAMVNLTGT ILHTVLTRKNATFLEGVKDYECAALIQSLAVVLVPVSLFLSQYGYEIAAIFVFCVITALLALTEIAMNGAAWTVSYALRR QGKQGEYEASSNFIDGAFGILYPYITTPLCSSFSMIGWWIVGSISAVGVIIMRLFIKSPSTNNKKQVG
Sequences:
>Translated_468_residues MQYVYDIVKSNIKYASSDFLSFRIIFMVYLNNLLHKIAIVRITELDSALRIMCFNTLLNNIGSVAMVSTWSVYVTGILKF STLWLTVSGCAMAAGMMIGSACCGTITDRLEPRSVICASNICFGMCMALLCFITDPAAITILLAMSGLSSSFYHPARSIL IVRYTPSDDIATTRSVTASYGYLGTILGTIGSLLALSGNTRSWYIVAIAVNAISSFLVSVSALRLPRIRDHSENKSVRNA FYWLRKSFNSIRNINFKMLHLNAQGAMRDSRFIMTCILMNIPVLALYAFNTGMPVWLVKFTAFPTVLVGVHKAMVNLTGT ILHTVLTRKNATFLEGVKDYECAALIQSLAVVLVPVSLFLSQYGYEIAAIFVFCVITALLALTEIAMNGAAWTVSYALRR QGKQGEYEASSNFIDGAFGILYPYITTPLCSSFSMIGWWIVGSISAVGVIIMRLFIKSPSTNNKKQVG >Mature_468_residues MQYVYDIVKSNIKYASSDFLSFRIIFMVYLNNLLHKIAIVRITELDSALRIMCFNTLLNNIGSVAMVSTWSVYVTGILKF STLWLTVSGCAMAAGMMIGSACCGTITDRLEPRSVICASNICFGMCMALLCFITDPAAITILLAMSGLSSSFYHPARSIL IVRYTPSDDIATTRSVTASYGYLGTILGTIGSLLALSGNTRSWYIVAIAVNAISSFLVSVSALRLPRIRDHSENKSVRNA FYWLRKSFNSIRNINFKMLHLNAQGAMRDSRFIMTCILMNIPVLALYAFNTGMPVWLVKFTAFPTVLVGVHKAMVNLTGT ILHTVLTRKNATFLEGVKDYECAALIQSLAVVLVPVSLFLSQYGYEIAAIFVFCVITALLALTEIAMNGAAWTVSYALRR QGKQGEYEASSNFIDGAFGILYPYITTPLCSSFSMIGWWIVGSISAVGVIIMRLFIKSPSTNNKKQVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51437; Mature: 51437
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYVYDIVKSNIKYASSDFLSFRIIFMVYLNNLLHKIAIVRITELDSALRIMCFNTLLNN CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGSVAMVSTWSVYVTGILKFSTLWLTVSGCAMAAGMMIGSACCGTITDRLEPRSVICASN CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ICFGMCMALLCFITDPAAITILLAMSGLSSSFYHPARSILIVRYTPSDDIATTRSVTASY HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHH GYLGTILGTIGSLLALSGNTRSWYIVAIAVNAISSFLVSVSALRLPRIRDHSENKSVRNA HHHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FYWLRKSFNSIRNINFKMLHLNAQGAMRDSRFIMTCILMNIPVLALYAFNTGMPVWLVKF HHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHEECCCCCCEEEEHH TAFPTVLVGVHKAMVNLTGTILHTVLTRKNATFLEGVKDYECAALIQSLAVVLVPVSLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SQYGYEIAAIFVFCVITALLALTEIAMNGAAWTVSYALRRQGKQGEYEASSNFIDGAFGI HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LYPYITTPLCSSFSMIGWWIVGSISAVGVIIMRLFIKSPSTNNKKQVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MQYVYDIVKSNIKYASSDFLSFRIIFMVYLNNLLHKIAIVRITELDSALRIMCFNTLLNN CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGSVAMVSTWSVYVTGILKFSTLWLTVSGCAMAAGMMIGSACCGTITDRLEPRSVICASN CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ICFGMCMALLCFITDPAAITILLAMSGLSSSFYHPARSILIVRYTPSDDIATTRSVTASY HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCCCCEEEEEEECCCCCCCHHHHHHHHH GYLGTILGTIGSLLALSGNTRSWYIVAIAVNAISSFLVSVSALRLPRIRDHSENKSVRNA HHHHHHHHHHHHHHEECCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FYWLRKSFNSIRNINFKMLHLNAQGAMRDSRFIMTCILMNIPVLALYAFNTGMPVWLVKF HHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHEECCCCCCEEEEHH TAFPTVLVGVHKAMVNLTGTILHTVLTRKNATFLEGVKDYECAALIQSLAVVLVPVSLFL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHH SQYGYEIAAIFVFCVITALLALTEIAMNGAAWTVSYALRRQGKQGEYEASSNFIDGAFGI HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH LYPYITTPLCSSFSMIGWWIVGSISAVGVIIMRLFIKSPSTNNKKQVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA