Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is 213691793

Identifier: 213691793

GI number: 213691793

Start: 1066567

End: 1067292

Strand: Reverse

Name: 213691793

Synonym: Blon_0901

Alternate gene names: NA

Gene position: 1067292-1066567 (Counterclockwise)

Preceding gene: 213691807

Following gene: 213691792

Centisome position: 37.68

GC content: 62.53

Gene sequence:

>726_bases
ATGGCTCAGGTATGCGTGATTTTTGGTGCGGGCGAATACTATGCGGGCACGCCCGTGGTGCCGGCCGGCGCGTATGTGGT
GGCGGCCGATGGCGGGCTCGACCATACGCGCGAGTTGGGCATCGTGCCCGATGTGGTGGTGGGCGATTTCGATTCGCTGG
AGGGCCGGCCGCCTCGCACTGATGTGCGCACCATCGCGCTGCCCGCGTTGAAGGACGACCCGGACATGCTTTCCGCGCTG
AAGGTCGGTTGGTCGGCGGGTTGCCGCGAATTCCATGTCTATGGCGGTTTGGGCGGCCGCATTGACCATACGATTTCCGG
CATTCAACTGATGGCATTATTGGCCCGGCATGGGGCAAGCGGGTACCTGTATGGTGACGGGCTCATCGTCACGGCCATCA
CCGATGGCAGGCTTTCGTTCCCCGCGCATCCAGTGCCCGAGGACGGCCGTATGGTGTCGGCGTTCTCCCACTCCGATGTT
TCGCTTGGCGTGAACGAACCGGGGCTGAAATACGAGCTCAAGAACGGCACGCTGACCAATACGGTGGTGCAAGGCGTCAG
CAACGAGTTCCGCGACGGCGTGGACGCGGCCATCAGCGTGGAACACGGCACACTGATCGTCACTTTCCCCATCGAGGTGG
CATTGCCTCAGGTGAGCCGATTTCACGAATTTGGCGGCGATATCGGCGAGCTGGACACCGCAGTGTCCAAGCTGCTGGTT
CGCTGA

Upstream 100 bases:

>100_bases
CCCGCTTTCTTGATTTCTCAAGCCAAATAGGAATCCTACCACACGCCCGGACATTCGCGGCCCGTGTGTCGGTGGGTGGA
TACCGGCTACAGTGGGCATC

Downstream 100 bases:

>100_bases
CTCGTGTATCGTGCGCTTGCTCGTGATGATTCAAGACATTCCTCCAAAGGAGAGGAAAATCACATGCCGGTTGCGGGCAA
TCCGAATTGTGAGCGCTCAC

Product: thiamine pyrophosphokinase

Products: NA

Alternate protein names: Thiamine Diphosphokinase; Thiamin Pyrophosphokinase

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSAL
KVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDV
SLGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV
R

Sequences:

>Translated_241_residues
MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSAL
KVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDV
SLGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV
R
>Mature_240_residues
AQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRTDVRTIALPALKDDPDMLSALK
VGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGASGYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVS
LGVNEPGLKYELKNGTLTNTVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLVR

Specific function: Unknown

COG id: COG1564

COG function: function code H; Thiamine pyrophosphokinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25398; Mature: 25267

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRT
CCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCEEECCCHHCCCCCCCC
DVRTIALPALKDDPDMLSALKVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGAS
CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
GYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVSLGVNEPGLKYELKNGTLTN
CEEEECCEEEEEEECCEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEECCCCCHH
TVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV
HHHHHHHHHHHCCCCEEEEEECCEEEEEEEHEEECHHHHHHHHHCCCHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
AQVCVIFGAGEYYAGTPVVPAGAYVVAADGGLDHTRELGIVPDVVVGDFDSLEGRPPRT
CEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHCCCCCCEEECCCHHCCCCCCCC
DVRTIALPALKDDPDMLSALKVGWSAGCREFHVYGGLGGRIDHTISGIQLMALLARHGAS
CCEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC
GYLYGDGLIVTAITDGRLSFPAHPVPEDGRMVSAFSHSDVSLGVNEPGLKYELKNGTLTN
CEEEECCEEEEEEECCEEECCCCCCCCCCCEEEEECCCCEEECCCCCCCEEEECCCCCHH
TVVQGVSNEFRDGVDAAISVEHGTLIVTFPIEVALPQVSRFHEFGGDIGELDTAVSKLLV
HHHHHHHHHHHCCCCEEEEEECCEEEEEEEHEEECHHHHHHHHHCCCHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA