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The map label for this gene is infC [H]

Identifier: 213691794

GI number: 213691794

Start: 1067690

End: 1068325

Strand: Direct

Name: infC [H]

Synonym: Blon_0902

Alternate gene names: 213691794

Gene position: 1067690-1068325 (Clockwise)

Preceding gene: 213691790

Following gene: 213691795

Centisome position: 37.69

GC content: 60.85

Gene sequence:

>636_bases
GTGGGCGTCATCGCGACTTCCGTCGCGCTGAACCTGGCCAAGGAGGCAAACCTCGATCTCGTCGAGGTGGCCCCGAACGC
GAAGCCTCCGGTCGCCAAGCTCATTGATTACGGCAAGTTCAAGTACAACGAGAAGATCAAGGCTCGTGAGGCTCGCCGCA
ACCAGAGCACCGCGGAAATCAAGGAGATTCGTTTCCGCCTGAAGATCGACGACCACGATTTCGACGTGAAGAAGGGCCAT
GTGACCCGTTTCCTTAACGGAGGCGACAAGGTCAAGGTCACCATCATGTTGCGCGGTCGTGAGATCTCCCGCCCGATTGG
TGGCGTGGAACTGCTGCAGCGTTTGGCCGACGATGTCGAGGAATACGGCACCGTCGAGTCCAAGCCGAAGCAGGAGGGCC
GCAACATCATCATGACCCTTGCGCCGAAGGGCAAGAAGGTCCACACCCAGTCCGAGCAGCGTCGTCGTGGCGCCGAGTCC
CGCGCCGAGCGTCAGGCTCGCCAGGCGGCTCGTCTCGCGGCCAAGCAGGAGTCTCAGGCTCAGGCCGCGGCCGACGCGCA
GTCCGCGATTTCTCAGAAGACTTCCGACAAGAAGCAAACCAGCAAGGAGGGCAGCAATGCCGAAGATGAAAACTAA

Upstream 100 bases:

>100_bases
ATTAAAGTAGAGGATTGGAGTCATCATCAGCGACGAACCACGTATTAACGACGAGATTCGCGTCCCGCAGGTACGCCTGA
TCGGCCCGAAGGGCGAGCAG

Downstream 100 bases:

>100_bases
TTCCGCCGCTTCCAAGCGCGCCAAGATCACCGGCACCGGCAAGGTGAAGCATGTCGGTTCCGCCATGCGCCACAACCTCG
AGCACAAGTCCGCTCGCAAG

Product: initiation factor 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGVIATSVALNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFDVKKGH
VTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKPKQEGRNIIMTLAPKGKKVHTQSEQRRRGAES
RAERQARQAARLAAKQESQAQAAADAQSAISQKTSDKKQTSKEGSNAEDEN

Sequences:

>Translated_211_residues
MGVIATSVALNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFDVKKGH
VTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKPKQEGRNIIMTLAPKGKKVHTQSEQRRRGAES
RAERQARQAARLAAKQESQAQAAADAQSAISQKTSDKKQTSKEGSNAEDEN
>Mature_210_residues
GVIATSVALNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFDVKKGHV
TRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVEEYGTVESKPKQEGRNIIMTLAPKGKKVHTQSEQRRRGAESR
AERQARQAARLAAKQESQAQAAADAQSAISQKTSDKKQTSKEGSNAEDEN

Specific function: IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins [H]

COG id: COG0290

COG function: function code J; Translation initiation factor 3 (IF-3)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IF-3 family [H]

Homologues:

Organism=Escherichia coli, GI1788012, Length=147, Percent_Identity=45.578231292517, Blast_Score=130, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001288
- InterPro:   IPR019815
- InterPro:   IPR019814 [H]

Pfam domain/function: PF00707 IF3_C; PF05198 IF3_N [H]

EC number: NA

Molecular weight: Translated: 23433; Mature: 23302

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVIATSVALNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEI
CCEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
KEIRFRLKIDDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVE
HHHHEEEEECCCCCCCCCCHHHHEECCCCEEEEEEEEECCHHCCCCCHHHHHHHHHHHHH
EYGTVESKPKQEGRNIIMTLAPKGKKVHTQSEQRRRGAESRAERQARQAARLAAKQESQA
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QAAADAQSAISQKTSDKKQTSKEGSNAEDEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GVIATSVALNLAKEANLDLVEVAPNAKPPVAKLIDYGKFKYNEKIKAREARRNQSTAEI
CEEHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCHHHH
KEIRFRLKIDDHDFDVKKGHVTRFLNGGDKVKVTIMLRGREISRPIGGVELLQRLADDVE
HHHHEEEEECCCCCCCCCCHHHHEECCCCEEEEEEEEECCHHCCCCCHHHHHHHHHHHHH
EYGTVESKPKQEGRNIIMTLAPKGKKVHTQSEQRRRGAESRAERQARQAARLAAKQESQA
HHCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QAAADAQSAISQKTSDKKQTSKEGSNAEDEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]