Definition Bifidobacterium longum subsp. infantis ATCC 15697, complete genome.
Accession NC_011593
Length 2,832,748

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The map label for this gene is rpmI

Identifier: 213691795

GI number: 213691795

Start: 1068306

End: 1068500

Strand: Direct

Name: rpmI

Synonym: Blon_0903

Alternate gene names: 213691795

Gene position: 1068306-1068500 (Clockwise)

Preceding gene: 213691794

Following gene: 213691796

Centisome position: 37.71

GC content: 61.54

Gene sequence:

>195_bases
ATGCCGAAGATGAAAACTAATTCCGCCGCTTCCAAGCGCGCCAAGATCACCGGCACCGGCAAGGTGAAGCATGTCGGTTC
CGCCATGCGCCACAACCTCGAGCACAAGTCCGCTCGCAAGCGCCGTGAACTGTCCGCCGACGATGTGCTGCGCGGCGGCC
AGGCCAAGAAGCTGCACCAGCTTCTGCAGAAGTGA

Upstream 100 bases:

>100_bases
GCGGCCAAGCAGGAGTCTCAGGCTCAGGCCGCGGCCGACGCGCAGTCCGCGATTTCTCAGAAGACTTCCGACAAGAAGCA
AACCAGCAAGGAGGGCAGCA

Downstream 100 bases:

>100_bases
ACATAGGGCTTACCCGGAAATAATAAGACTTTAGAAAGCTGAGGAATAGATTATGGCACGTGTCAAGCGCGCAGTGAACG
CCCACAAGAAGCGTCGCGTT

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK

Sequences:

>Translated_64_residues
MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK
>Mature_63_residues
PKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQLLQK

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_BIFLD (B3DQT3)

Other databases:

- EMBL:   CP000605
- RefSeq:   YP_001954177.1
- ProteinModelPortal:   B3DQT3
- SMR:   B3DQT3
- GeneID:   6364103
- GenomeReviews:   CP000605_GR
- KEGG:   blj:BLD_0233
- HOGENOM:   HBG734125
- OMA:   MMNETTI
- ProtClustDB:   PRK00172
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 7116; Mature: 6985

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCCHHHHHH
LLQK
HHHC
>Mature Secondary Structure 
PKMKTNSAASKRAKITGTGKVKHVGSAMRHNLEHKSARKRRELSADDVLRGGQAKKLHQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHCCCCHHHHHH
LLQK
HHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA