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The map label for this gene is nudB [C]

Identifier: 213691779

GI number: 213691779

Start: 1047181

End: 1047726

Strand: Reverse

Name: nudB [C]

Synonym: Blon_0887

Alternate gene names: 213691779

Gene position: 1047726-1047181 (Counterclockwise)

Preceding gene: 213691780

Following gene: 213691772

Centisome position: 36.99

GC content: 61.9

Gene sequence:

>546_bases
GTGGATGTCGGAACGGGCCAACGCATGAGCACGCCCCCGTTCATTCTGGAACTGCGTAAGAAGATCGGCCATGATTTGTT
GTGGCTGCATGGCGTGACGGCATGCGTACTTGACGAACATGGACGCATACTGCTGGGTCGGCGCGCCGACACCGGAGAGT
GGGCGATGGTGTACGGCATCATCGACCCGGGCGAGCAGCCTGCCGACGCCGCGGTACGCGAGGTGAAGGAGGAGACCGGC
GTGGACGTCGTGGTCACCGACTTGGTGTCCGTGAATTCCGAGCAGCGTATCCTCACCTATGCCAACGGCGACCACGCGCA
GTATATGGATCATTCCTTCCTGTGCGCGCTCAAGCCCGGCGGCAATGCCGAACCGTTTGTGGGGGATGACGAAAGCCTCA
ACGTCGGCTGGTTCGCATTGAACGAATTGCCCTCTCCCCTAGCCCATAGCACCACGGAACGCCTGTCGGTGTTCCGCCGC
TATCTTGAGGCCAAGGCGAAGGGCGACGCCCATGCCTTGTTCATGGCCGACGGCCGGATGCACTAG

Upstream 100 bases:

>100_bases
GCGGCATCGGCATCCGTATCGAGGACGACGTGCTCATGACCGAGAACGGCCCCGAATGGATTTCCGCCGGCATCCCGAAG
ACCATCGAGGGAGTCGAGGC

Downstream 100 bases:

>100_bases
CCGCGGCTCGTGCGCCTTCGTTTCTTGCCCTTTTTCATGGGAGGGGCGAGAAACGGTGTGAGGCAACGGCCTGGGTGACC
AGGCCGTTGCCTCACACCGT

Product: NUDIX hydrolase

Products: dAMP; pyrophosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MDVGTGQRMSTPPFILELRKKIGHDLLWLHGVTACVLDEHGRILLGRRADTGEWAMVYGIIDPGEQPADAAVREVKEETG
VDVVVTDLVSVNSEQRILTYANGDHAQYMDHSFLCALKPGGNAEPFVGDDESLNVGWFALNELPSPLAHSTTERLSVFRR
YLEAKAKGDAHALFMADGRMH

Sequences:

>Translated_181_residues
MDVGTGQRMSTPPFILELRKKIGHDLLWLHGVTACVLDEHGRILLGRRADTGEWAMVYGIIDPGEQPADAAVREVKEETG
VDVVVTDLVSVNSEQRILTYANGDHAQYMDHSFLCALKPGGNAEPFVGDDESLNVGWFALNELPSPLAHSTTERLSVFRR
YLEAKAKGDAHALFMADGRMH
>Mature_181_residues
MDVGTGQRMSTPPFILELRKKIGHDLLWLHGVTACVLDEHGRILLGRRADTGEWAMVYGIIDPGEQPADAAVREVKEETG
VDVVVTDLVSVNSEQRILTYANGDHAQYMDHSFLCALKPGGNAEPFVGDDESLNVGWFALNELPSPLAHSTTERLSVFRR
YLEAKAKGDAHALFMADGRMH

Specific function: Hydrolysis Of Nucleoside Triphosphates With A Preference For Datp. [C]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 19941; Mature: 19941

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVGTGQRMSTPPFILELRKKIGHDLLWLHGVTACVLDEHGRILLGRRADTGEWAMVYGI
CCCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHEEEEECCCCCEEEECCCCCCCEEEEEEE
IDPGEQPADAAVREVKEETGVDVVVTDLVSVNSEQRILTYANGDHAQYMDHSFLCALKPG
ECCCCCCHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEEEEECCCCHHHCCCEEEEEECCC
GNAEPFVGDDESLNVGWFALNELPSPLAHSTTERLSVFRRYLEAKAKGDAHALFMADGRM
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
H
C
>Mature Secondary Structure
MDVGTGQRMSTPPFILELRKKIGHDLLWLHGVTACVLDEHGRILLGRRADTGEWAMVYGI
CCCCCCCCCCCCHHHHHHHHHHCCCEEHHHHHEEEEECCCCCEEEECCCCCCCEEEEEEE
IDPGEQPADAAVREVKEETGVDVVVTDLVSVNSEQRILTYANGDHAQYMDHSFLCALKPG
ECCCCCCHHHHHHHHHHHCCCEEEEEHHHHCCCCCEEEEEECCCCHHHCCCEEEEEECCC
GNAEPFVGDDESLNVGWFALNELPSPLAHSTTERLSVFRRYLEAKAKGDAHALFMADGRM
CCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxy-ATP; H2O [C]

Specific reaction: deoxy-ATP + H2O = dAMP + pyrophosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]