| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is pepPI [H]
Identifier: 213691780
GI number: 213691780
Start: 1047699
End: 1049288
Strand: Reverse
Name: pepPI [H]
Synonym: Blon_0888
Alternate gene names: 213691780
Gene position: 1049288-1047699 (Counterclockwise)
Preceding gene: 213691781
Following gene: 213691779
Centisome position: 37.04
GC content: 63.77
Gene sequence:
>1590_bases ATGGGTGAAGTGATCACCGCCAAGGACAAGGAATATGAGGCCGAAGAGCGCGCTACGGCGCCGGGCGCGAACCAGTCGAT GAGCGACCGCGTGAACAACCGCTCGCTGCGCCCGCAGTCGGCCGCATTCAAGGAGTTCATGAAGTCCGGCTGGGCCGATG ACGATCCGGAGATCAAGCCTCTCGAATCCTCCAAGTTCACGCCAGCCCGTCTTGAGGCGCTGGGCAAGGCATTCCCCGGC GAGCGTCTGGTCATTCCGGCCGGCCAGCCGAAGGTGCGCAACAATGATTGCGATTACATGTTCCGCCCGGACACCACGTT CGCCTACTACACCGGCCTGGGTTCCGATTATGAAGCTGGTGCCGTGCTGGTCCTGAACCCGGTCGATCCCGACTCCCCCG AAGCTGCCGCCGGCAAGACCCACACCCCGGAACTGTTTGTGGCACCGCGCGCCGACAACTCCACCGAGGACTTCTTCATG TCCGCCCACTACGGCGAATACTGGGTTGGCCCGCGTGCTGGCCTCCAGGAGATGCAGGCGATGACCGGCATCGAAACCCA CGACATCGCCCAGCTGGCTGACGCCCTGTCCAAGGACGTGGGTGCCGAGGCCGGTGCCGTGCGTGTGCGCGTGGTCAGCG AGACCGACCCCGAAATCACTTCGATGGTCGAGTCCATCCGCGAGGCCAACGGTTTCGCCGATCCGGACAAGAACTCCGCA TCCGACGACAAGCTGCACGAGTTCGCCGCCGAGGCACGCATGGTCAAAGACGGCTACGAAATCAACGAGATGCGCAAGGC CGTGGACGCCACCAAGCATGGCTTCGACCGCCTGCTGTCCGCACTGCCGGACGCGCTGGACAAGCCGCGCTCCGAGCGTA TCCTCGAAGGCGCGTTCAACGCTGTATCCCGCGAGATCGGCAACGCCGTCGGCTACGACTCCATCGTGGCCTCCGGCCCC CACGCTCCGATTCTGCATTGGATGCGCAACACCGGTGTGGTGAAGAACGGCGACATGCTGTTGGTGGATGCCGGCGTTGA GGTCGATTCCCTGTACACGGCCGACATCACCCGTACCTTCCCGACCAACGGCAAGTTCACCGACTTCCAGAAGCGTCTGT ACCAGGCCGTGCTCGACTCGCAGCAGGCCGGTTTCGAAGCCGCCAAGCCGGGTGCCACCTACTCCGACATCCACCACGCC TGCATGCGCGTGATTGCCGAATGTCTGCACGATTGGGGTCTGCTGCCGGTGAGCGTCGAGGAGTCGCTGTCTCCGCAAGG CCAGCAGCACCGCCGTTGGCTCGCCTGCGGTGTGGCCCACCACTTGGGTCTTGATGTGCACGATTGCGCGCAGGCTCGTT TCGAGTCCTATCAGGGCGCGCCGATTCGTCCGGGCATGATCTTCACGATCGAGCCCGGCCTGTACTTCCGCGAGGATGAT CTGCTGATTCCGCCGGAATACCGCGGCATCGGCATCCGTATCGAGGACGACGTGCTCATGACCGAGAACGGCCCCGAATG GATTTCCGCCGGCATCCCGAAGACCATCGAGGGAGTCGAGGCGTGGATGTCGGAACGGGCCAACGCATGA
Upstream 100 bases:
>100_bases GGTTTTACCGTCAGCCGTCAATCGTGGCACATCGCATAAAGCCGACTAGTATGAAGTGGGAATCGATGATTCGACAACAA CTACATACAGGAGAGTGGCA
Downstream 100 bases:
>100_bases GCACGCCCCCGTTCATTCTGGAACTGCGTAAGAAGATCGGCCATGATTTGTTGTGGCTGCATGGCGTGACGGCATGCGTA CTTGACGAACATGGACGCAT
Product: peptidase M24
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase I; Aminopeptidase P I; APP; PEPP I; X-Pro aminopeptidase I; Xaa-Pro aminopeptidase I [H]
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MGEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKPLESSKFTPARLEALGKAFPG ERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAGAVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFM SAHYGEYWVGPRAGLQEMQAMTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPEITSMVESIREANGFADPDKNSA SDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPDALDKPRSERILEGAFNAVSREIGNAVGYDSIVASGP HAPILHWMRNTGVVKNGDMLLVDAGVEVDSLYTADITRTFPTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHA CMRVIAECLHDWGLLPVSVEESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAPIRPGMIFTIEPGLYFREDD LLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKTIEGVEAWMSERANA
Sequences:
>Translated_529_residues MGEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKPLESSKFTPARLEALGKAFPG ERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAGAVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFM SAHYGEYWVGPRAGLQEMQAMTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPEITSMVESIREANGFADPDKNSA SDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPDALDKPRSERILEGAFNAVSREIGNAVGYDSIVASGP HAPILHWMRNTGVVKNGDMLLVDAGVEVDSLYTADITRTFPTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHA CMRVIAECLHDWGLLPVSVEESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAPIRPGMIFTIEPGLYFREDD LLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKTIEGVEAWMSERANA >Mature_528_residues GEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKPLESSKFTPARLEALGKAFPGE RLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAGAVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFMS AHYGEYWVGPRAGLQEMQAMTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPEITSMVESIREANGFADPDKNSAS DDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPDALDKPRSERILEGAFNAVSREIGNAVGYDSIVASGPH APILHWMRNTGVVKNGDMLLVDAGVEVDSLYTADITRTFPTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHAC MRVIAECLHDWGLLPVSVEESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAPIRPGMIFTIEPGLYFREDDL LIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKTIEGVEAWMSERANA
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI11559925, Length=461, Percent_Identity=30.3687635574837, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI260593665, Length=329, Percent_Identity=31.306990881459, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI149589008, Length=329, Percent_Identity=31.306990881459, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI260593663, Length=244, Percent_Identity=35.2459016393443, Blast_Score=125, Evalue=1e-28, Organism=Escherichia coli, GI1789275, Length=463, Percent_Identity=29.5896328293737, Blast_Score=179, Evalue=4e-46, Organism=Escherichia coli, GI1788728, Length=269, Percent_Identity=27.1375464684015, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790282, Length=296, Percent_Identity=29.7297297297297, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17508215, Length=315, Percent_Identity=32.6984126984127, Blast_Score=135, Evalue=6e-32, Organism=Caenorhabditis elegans, GI71989583, Length=287, Percent_Identity=26.8292682926829, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321118, Length=299, Percent_Identity=32.7759197324415, Blast_Score=143, Evalue=8e-35, Organism=Saccharomyces cerevisiae, GI6320922, Length=370, Percent_Identity=28.9189189189189, Blast_Score=141, Evalue=2e-34, Organism=Drosophila melanogaster, GI19920384, Length=452, Percent_Identity=30.5309734513274, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI21357079, Length=496, Percent_Identity=29.8387096774194, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 58083; Mature: 57952
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKP CCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC LESSKFTPARLEALGKAFPGERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAG CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC AVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFMSAHYGEYWVGPRAGLQEMQA EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEEECCCCCEECCCHHHHHHHHH MTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPEITSMVESIREANGFADPDKNSA HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC SDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPDALDKPRSERILEGAFN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVSREIGNAVGYDSIVASGPHAPILHWMRNTGVVKNGDMLLVDAGVEVDSLYTADITRTF HHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEECCCEEEEECCCCCCCEEEECCEEEC PTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAECLHDWGLLPVSVE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHH ESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAPIRPGMIFTIEPGLYFREDD HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCC LLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKTIEGVEAWMSERANA EECCCCCCCEEEEEECCEEEECCCCHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEIKP CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCC LESSKFTPARLEALGKAFPGERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAG CCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCC AVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFMSAHYGEYWVGPRAGLQEMQA EEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEEECCCCCEECCCHHHHHHHHH MTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPEITSMVESIREANGFADPDKNSA HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC SDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPDALDKPRSERILEGAFN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AVSREIGNAVGYDSIVASGPHAPILHWMRNTGVVKNGDMLLVDAGVEVDSLYTADITRTF HHHHHHHHHCCCHHHHCCCCCHHHHHHHHCCCEEECCCEEEEECCCCCCCEEEECCEEEC PTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAECLHDWGLLPVSVE CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHH ESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAPIRPGMIFTIEPGLYFREDD HCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCC LLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKTIEGVEAWMSERANA EECCCCCCCEEEEEECCEEEECCCCHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]