| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691745
Identifier: 213691745
GI number: 213691745
Start: 1003261
End: 1004088
Strand: Direct
Name: 213691745
Synonym: Blon_0851
Alternate gene names: NA
Gene position: 1003261-1004088 (Clockwise)
Preceding gene: 213691744
Following gene: 213691746
Centisome position: 35.42
GC content: 59.54
Gene sequence:
>828_bases ATGCTGGTCGAACGGTACGGTTTTGAAGTCGATCCACCCTTCGCCACCAATGTCACCATTACCTCACTCAGCGATGCCGT GGATACCGTTATTCCCGGCTCGCTGTTCATCTGCACGCATGAGCAGGAACCCGATGTACTGCATGCCGCACAGGCAGGTG CCTATGCGGCGTTGCTGCCACGCGCGTCCAAAGGGCAGATCGCCAATGCCGATATACCGTTGCTCTACGGCGATTGCGAC GATCGCGTACTCGGCGATCTGGCCAGCGGCCTGGCCGGCGGACCATCCAACGCCATGGCGGTGTTCGCGGTGACCGGTGC GGATGAGCAGGCCGTCGACGCAGGCGTGTCCCAGCTCTCCGAATTCCTGCACATGCTGGGCAATCCGGTGGCGGTAATCA CCGCATCCGGGTCCACGTCGATGACACGTACCATGAACCTGAACTATCCTCTGGGCATCCTCGATATGCAGCGCGCGCTG TCCGTGTGCGCCGAAGACGGTGTGGCGGCCGTGATCATCGCCATGGATGACCGCACATTGGCCGAGCATGCGTTGGAATC GGTGAACGTGGATGTGCTGGGCACGGAAGATGTCAACGCAAGCGCAAGCTTGGACGAATTGAAGACACGCTACGCATTCG TTGCGGAACATGACATGTCCATGACCTCGTCGACACCCGAATCGGATGAAATGGCTGCGGATTCACCGGCCATGTACGAC CGCGTCCGACTCGGGCACATGTCCTTGGCCATCGCCATGGTACTGGCCGCCGGCGTGAGGAAAAACAACATACGCAGTGC CCTGCATGTGGCCAATAATCTCAATTAA
Upstream 100 bases:
>100_bases GAAAAAATGCTATTCCAGTCACGTGGTAAGGATCAGGGGAGAAAGGCGATAGCCCATGAGTGCAGTGAGCGAATCCATCG CCCAGCGGGTGACCTTGGGA
Downstream 100 bases:
>100_bases GTCCGTGGATGCGGGACGAAGCGTAATCGTAAAGGAGTTTGAAACACCATGGTTCCGATGAGCGTGGAGGAGATCGCCAA GGCCGTCGATGGTCGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MLVERYGFEVDPPFATNVTITSLSDAVDTVIPGSLFICTHEQEPDVLHAAQAGAYAALLPRASKGQIANADIPLLYGDCD DRVLGDLASGLAGGPSNAMAVFAVTGADEQAVDAGVSQLSEFLHMLGNPVAVITASGSTSMTRTMNLNYPLGILDMQRAL SVCAEDGVAAVIIAMDDRTLAEHALESVNVDVLGTEDVNASASLDELKTRYAFVAEHDMSMTSSTPESDEMAADSPAMYD RVRLGHMSLAIAMVLAAGVRKNNIRSALHVANNLN
Sequences:
>Translated_275_residues MLVERYGFEVDPPFATNVTITSLSDAVDTVIPGSLFICTHEQEPDVLHAAQAGAYAALLPRASKGQIANADIPLLYGDCD DRVLGDLASGLAGGPSNAMAVFAVTGADEQAVDAGVSQLSEFLHMLGNPVAVITASGSTSMTRTMNLNYPLGILDMQRAL SVCAEDGVAAVIIAMDDRTLAEHALESVNVDVLGTEDVNASASLDELKTRYAFVAEHDMSMTSSTPESDEMAADSPAMYD RVRLGHMSLAIAMVLAAGVRKNNIRSALHVANNLN >Mature_275_residues MLVERYGFEVDPPFATNVTITSLSDAVDTVIPGSLFICTHEQEPDVLHAAQAGAYAALLPRASKGQIANADIPLLYGDCD DRVLGDLASGLAGGPSNAMAVFAVTGADEQAVDAGVSQLSEFLHMLGNPVAVITASGSTSMTRTMNLNYPLGILDMQRAL SVCAEDGVAAVIIAMDDRTLAEHALESVNVDVLGTEDVNASASLDELKTRYAFVAEHDMSMTSSTPESDEMAADSPAMYD RVRLGHMSLAIAMVLAAGVRKNNIRSALHVANNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28883; Mature: 28883
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVERYGFEVDPPFATNVTITSLSDAVDTVIPGSLFICTHEQEPDVLHAAQAGAYAALLP CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECC RASKGQIANADIPLLYGDCDDRVLGDLASGLAGGPSNAMAVFAVTGADEQAVDAGVSQLS CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHH EFLHMLGNPVAVITASGSTSMTRTMNLNYPLGILDMQRALSVCAEDGVAAVIIAMDDRTL HHHHHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHH AEHALESVNVDVLGTEDVNASASLDELKTRYAFVAEHDMSMTSSTPESDEMAADSPAMYD HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHH RVRLGHMSLAIAMVLAAGVRKNNIRSALHVANNLN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MLVERYGFEVDPPFATNVTITSLSDAVDTVIPGSLFICTHEQEPDVLHAAQAGAYAALLP CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCEEEECC RASKGQIANADIPLLYGDCDDRVLGDLASGLAGGPSNAMAVFAVTGADEQAVDAGVSQLS CCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHH EFLHMLGNPVAVITASGSTSMTRTMNLNYPLGILDMQRALSVCAEDGVAAVIIAMDDRTL HHHHHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCHH AEHALESVNVDVLGTEDVNASASLDELKTRYAFVAEHDMSMTSSTPESDEMAADSPAMYD HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHH RVRLGHMSLAIAMVLAAGVRKNNIRSALHVANNLN HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA