| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691702
Identifier: 213691702
GI number: 213691702
Start: 935813
End: 936859
Strand: Reverse
Name: 213691702
Synonym: Blon_0807
Alternate gene names: NA
Gene position: 936859-935813 (Counterclockwise)
Preceding gene: 213691709
Following gene: 213691692
Centisome position: 33.07
GC content: 51.96
Gene sequence:
>1047_bases ATGGCCGTCTCATCGCAACAAGCAACACCTTCCACTGCGCAGATTGTCATCGAGATTCTCGAACTGCTGGATGCGCATAC AGACCGCGAGCACGGGATTACTGCCACTGAGATCAGCAAGCGCATCAGCGTTTCGGAAAAGACCGTACGAGGGCATCTCA AGGCGTTGCGTGACATGCAACCATTCGGCCGTCGGGTGGAGCATCTGGAGCGTCGAGACCTGCTCTCTGCTGAAAGCGCT GATCCAAAGCCGGGATGGTACATTGAACCGGTGTTTGATACGGCCCAGATGCGTCTGCTTGCGGACGGCGCGGTAATATC ACGGTCTGACAGCGAATATCTGAGCGACCTTATCGCCAAAATCTATACGTTCGCGGGCAAGTCGGGCCAATTGCGCGGTC TGAGGCAGCTCACTACGCCAAAGAATTACAACACCGAGTTTCTCAACAATATCGAAATGCTCAACGATGCCATCGAACAC GAACGAGTAATTCGATTCCGTTACTGCACCTATGACATTGATGGCAATCTGGTTCCTCGCCGCGACAATGCGGGTGAAAT CAAAGAATACCAAGCCGATCCGTACCATCTGATGTACAAGAACAACAAATACTATCTGATTTGCCACATGCATCAGCATG ACAGTCTCTCGTATCTGCACGTAGAACGTTTCCGCAACCTTTACGTCGAGGAGACTGATCATGCGCTCAATCGCTCACTG GATAGCTTCAGTCCGATTCCGGGAACGCCGTTCAACATCGAAGAGCATATGGACGAACGCCCTTACCCCATGGACGGCGC AGCAGTACCGATTCACCTGCGTATTACCGGCACGCTGGAGCCCTTGTACGACTGGTTCGACAACGCCAAGGTCACTCAAA TCAGCGCCAACGAATACGACGTGCATATCATGGCCAACGAATTAGCGACCTTGTGGTGGGCATTGCAATATGCCGATTCG CGCCTCATTGAAGTCCTTGAACCACAATCCTTACGCATTATGCTGCGAGATACTGGCGAATCTTTGCTAGAAAAGTATCG AGACTAG
Upstream 100 bases:
>100_bases ATTCGAATCGGCTGCATGTTCAGTTTCCTGCCGCGCTACAATCAACGGTAATTATCTACTGGTTCTTGAAGCAGTCTCGA TACTCAGCGAGAGGAACATG
Downstream 100 bases:
>100_bases CTAGTCCCGCTATATTCTCACCAACGCTCAGCTCTTTTGTCGGCACTCGGCAATGAGGGCGGCACAGAGCAAAATGACCT GGGCGACGAGGTTGAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAVSSQQATPSTAQIVIEILELLDAHTDREHGITATEISKRISVSEKTVRGHLKALRDMQPFGRRVEHLERRDLLSAESA DPKPGWYIEPVFDTAQMRLLADGAVISRSDSEYLSDLIAKIYTFAGKSGQLRGLRQLTTPKNYNTEFLNNIEMLNDAIEH ERVIRFRYCTYDIDGNLVPRRDNAGEIKEYQADPYHLMYKNNKYYLICHMHQHDSLSYLHVERFRNLYVEETDHALNRSL DSFSPIPGTPFNIEEHMDERPYPMDGAAVPIHLRITGTLEPLYDWFDNAKVTQISANEYDVHIMANELATLWWALQYADS RLIEVLEPQSLRIMLRDTGESLLEKYRD
Sequences:
>Translated_348_residues MAVSSQQATPSTAQIVIEILELLDAHTDREHGITATEISKRISVSEKTVRGHLKALRDMQPFGRRVEHLERRDLLSAESA DPKPGWYIEPVFDTAQMRLLADGAVISRSDSEYLSDLIAKIYTFAGKSGQLRGLRQLTTPKNYNTEFLNNIEMLNDAIEH ERVIRFRYCTYDIDGNLVPRRDNAGEIKEYQADPYHLMYKNNKYYLICHMHQHDSLSYLHVERFRNLYVEETDHALNRSL DSFSPIPGTPFNIEEHMDERPYPMDGAAVPIHLRITGTLEPLYDWFDNAKVTQISANEYDVHIMANELATLWWALQYADS RLIEVLEPQSLRIMLRDTGESLLEKYRD >Mature_347_residues AVSSQQATPSTAQIVIEILELLDAHTDREHGITATEISKRISVSEKTVRGHLKALRDMQPFGRRVEHLERRDLLSAESAD PKPGWYIEPVFDTAQMRLLADGAVISRSDSEYLSDLIAKIYTFAGKSGQLRGLRQLTTPKNYNTEFLNNIEMLNDAIEHE RVIRFRYCTYDIDGNLVPRRDNAGEIKEYQADPYHLMYKNNKYYLICHMHQHDSLSYLHVERFRNLYVEETDHALNRSLD SFSPIPGTPFNIEEHMDERPYPMDGAAVPIHLRITGTLEPLYDWFDNAKVTQISANEYDVHIMANELATLWWALQYADSR LIEVLEPQSLRIMLRDTGESLLEKYRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40289; Mature: 40158
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSSQQATPSTAQIVIEILELLDAHTDREHGITATEISKRISVSEKTVRGHLKALRDMQ CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PFGRRVEHLERRDLLSAESADPKPGWYIEPVFDTAQMRLLADGAVISRSDSEYLSDLIAK HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHEEEECCCEEECCCHHHHHHHHHH IYTFAGKSGQLRGLRQLTTPKNYNTEFLNNIEMLNDAIEHERVIRFRYCTYDIDGNLVPR HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECC RDNAGEIKEYQADPYHLMYKNNKYYLICHMHQHDSLSYLHVERFRNLYVEETDHALNRSL CCCCCCHHHCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCH DSFSPIPGTPFNIEEHMDERPYPMDGAAVPIHLRITGTLEPLYDWFDNAKVTQISANEYD HCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEEEEECCCEE VHIMANELATLWWALQYADSRLIEVLEPQSLRIMLRDTGESLLEKYRD EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCC >Mature Secondary Structure AVSSQQATPSTAQIVIEILELLDAHTDREHGITATEISKRISVSEKTVRGHLKALRDMQ CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PFGRRVEHLERRDLLSAESADPKPGWYIEPVFDTAQMRLLADGAVISRSDSEYLSDLIAK HHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHEEEECCCEEECCCHHHHHHHHHH IYTFAGKSGQLRGLRQLTTPKNYNTEFLNNIEMLNDAIEHERVIRFRYCTYDIDGNLVPR HHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCEECC RDNAGEIKEYQADPYHLMYKNNKYYLICHMHQHDSLSYLHVERFRNLYVEETDHALNRSL CCCCCCHHHCCCCCEEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHCCH DSFSPIPGTPFNIEEHMDERPYPMDGAAVPIHLRITGTLEPLYDWFDNAKVTQISANEYD HCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEEECCHHHHHHHHCCCEEEEEECCCEE VHIMANELATLWWALQYADSRLIEVLEPQSLRIMLRDTGESLLEKYRD EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA