| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is thiM [H]
Identifier: 213691692
GI number: 213691692
Start: 924932
End: 925876
Strand: Reverse
Name: thiM [H]
Synonym: Blon_0797
Alternate gene names: 213691692
Gene position: 925876-924932 (Counterclockwise)
Preceding gene: 213691702
Following gene: 213691691
Centisome position: 32.68
GC content: 62.75
Gene sequence:
>945_bases ATGAGCAATAGTGCATCATCGTTTGCCGATGTGTCCAGCGGTTGTACCGCCGGGACTCCGGTTCCAGCCGATTCACCCAT CCGCGATAATATCGCCGATGCCGTTCGCCGCGTACGCGAGACGACTCCATTGGCCCAGTCATTCACCAATTTTGTGACCA TCAATTTGGTTGCCAACGCGCAACTGGCGGCCGGCGGCACTGCGGCCATGAGTTTCCTGCCGGACGACGTGATCGAAACC GCGAAAATCGCGGGCGCGAACTACATCAACGTGGGCACGCTGCTGCCGTTCTATAAGGATGCGCTGCCCGAAATCGCCCA GCGACTCAACTACTTGGACAAGCCGTGGGTGCTCGACCCGGTGGCCGCCGGCATCGGCCACACCCGCACCGCCATTCTTC AGACCTTCAAGGCCGCTCCCCCGACCATGATTCGCGCGAACGCCTCCGAGGTAATCGCGCTGGCGAACATGTGGGGGCTC AATACCGAAACCGTGGGGGACGCTTCCGAGCACCGCCCCGCCGGAGTGGAATCCGTCGACGACGTGGAGTCCGCAACCGG TGCGGCGGTGGCGCTGGCACAGTATCTGACCGAACAGCACGCCAAGCATTCCTCCCATGACGCTTCCACCCGCTGTGCAG TGGCTGTGTCCGGCATCGCCGATCTGGTGACCGACGGCGAAACCGTGTACCGACTGCCGGGCGGCAGCGCGATGATGACC AAGATCACCGGTGCAGGCTGCTCGCTGGGCGGCGTGGCTGCCACATATCTGGCGGTTTCCGATCCGTTGACCGCCGCTCT GTCCGCATCTCTGCTGTACAACCGCGCGGCAGAGATAGCCGATACGACTTCGCACGGGCCGGGCTCGTTCCAGGTCGCGT TCCTTGACGCGCTGTGGAATGTTACCGCCGAACAGGTGGCGGAATCCGAGATTTTGGTGCAGTAG
Upstream 100 bases:
>100_bases CACTGTAGTGCAGGGGGACTCGCATGTGGTTCGCGAGTTGAGAAAGGCCTGAGCCTGACCCTTAGAACCTGTTGGTTAAG ACCATCGTAGGGAGCAGTAA
Downstream 100 bases:
>100_bases TTTCAGTTCCCTCTGATGAGGGAGCTCATAACAGTTTTTCCCAATAAGACTTCCACAAGAAACAACAAAGGTAGGAATAA TAATGAGTAATGAATACCCA
Product: Hydroxyethylthiazole kinase
Products: NA
Alternate protein names: 4-methyl-5-beta-hydroxyethylthiazole kinase; TH kinase; Thz kinase [H]
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MSNSASSFADVSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANAQLAAGGTAAMSFLPDDVIET AKIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDPVAAGIGHTRTAILQTFKAAPPTMIRANASEVIALANMWGL NTETVGDASEHRPAGVESVDDVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMT KITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAAEIADTTSHGPGSFQVAFLDALWNVTAEQVAESEILVQ
Sequences:
>Translated_314_residues MSNSASSFADVSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANAQLAAGGTAAMSFLPDDVIET AKIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDPVAAGIGHTRTAILQTFKAAPPTMIRANASEVIALANMWGL NTETVGDASEHRPAGVESVDDVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMT KITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAAEIADTTSHGPGSFQVAFLDALWNVTAEQVAESEILVQ >Mature_313_residues SNSASSFADVSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANAQLAAGGTAAMSFLPDDVIETA KIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDPVAAGIGHTRTAILQTFKAAPPTMIRANASEVIALANMWGLN TETVGDASEHRPAGVESVDDVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMTK ITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAAEIADTTSHGPGSFQVAFLDALWNVTAEQVAESEILVQ
Specific function: Thiamine biosynthesis. [C]
COG id: COG2145
COG function: function code H; Hydroxyethylthiazole kinase, sugar kinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Thz kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788421, Length=274, Percent_Identity=35.4014598540146, Blast_Score=122, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6325042, Length=310, Percent_Identity=27.0967741935484, Blast_Score=91, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000417 [H]
Pfam domain/function: PF02110 HK [H]
EC number: =2.7.1.50 [H]
Molecular weight: Translated: 32493; Mature: 32361
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSASSFADVSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANA CCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEECC QLAAGGTAAMSFLPDDVIETAKIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDP EECCCCHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECH VAAGIGHTRTAILQTFKAAPPTMIRANASEVIALANMWGLNTETVGDASEHRPAGVESVD HHHCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH DVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEE KITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAAEIADTTSHGPGSFQVAFLDALWN EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH VTAEQVAESEILVQ HHHHHHHHHHHCCC >Mature Secondary Structure SNSASSFADVSSGCTAGTPVPADSPIRDNIADAVRRVRETTPLAQSFTNFVTINLVANA CCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEEEEEECC QLAAGGTAAMSFLPDDVIETAKIAGANYINVGTLLPFYKDALPEIAQRLNYLDKPWVLDP EECCCCHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEECH VAAGIGHTRTAILQTFKAAPPTMIRANASEVIALANMWGLNTETVGDASEHRPAGVESVD HHHCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH DVESATGAAVALAQYLTEQHAKHSSHDASTRCAVAVSGIADLVTDGETVYRLPGGSAMMT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEE KITGAGCSLGGVAATYLAVSDPLTAALSASLLYNRAAEIADTTSHGPGSFQVAFLDALWN EECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHH VTAEQVAESEILVQ HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA