| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
Click here to switch to the map view.
The map label for this gene is 213691709
Identifier: 213691709
GI number: 213691709
Start: 949832
End: 951769
Strand: Reverse
Name: 213691709
Synonym: Blon_0814
Alternate gene names: NA
Gene position: 951769-949832 (Counterclockwise)
Preceding gene: 213691710
Following gene: 213691702
Centisome position: 33.6
GC content: 43.4
Gene sequence:
>1938_bases ATGAGCAAATTAGTAACTGAACTTCATATTATTGGTGAAAACGGCAATATGTTCGACACAGATATGGAGTACATAATCCC TCTATACCAGAGAGCCTATGCGTGGGAGGACAAGCAACTCACCCAGCTGATTGAGGATATTAACGATGTTGCGGAGGACT CCAATTACTACATTGGCTCCTTGATCGTTTCCAAGCAGTTCGGACGATATGAAGTAGTGGATGGCCAGCAGCGGCTTACC TCGCTGTATTTGCTGCTGAACTGCCTTGGAATCAAAACAAAGCCCACACTCACATTTGCGTGTAGAGAAAAATCGAACTA TACCCTAAGAAACATTGAAGAACTACTGCTCGAAAACCGCAGCAAGATCGATATGGATCGGATTGAACCGGGAATCCAAA GGGGCATCAGGATACTATCTCACGAATTGACAAAGGATCATTTCGACAGGGAAAGCTTTATGGAAAAGCTGGCTAAAATT ATCGTCTATCGGATTGAGGTTCCGGAGAATACCGATCTGAACCGCTATTATGAGATAATGAACACCAGAGGTGAGCAATT AGAGCAACACGACATTCTAAAGGCCACGCTTATGAGCTATTTGAGTGATGATTCTGAGAAGGGCTTGTTTGCAAAGATAT GGGATGCTTGTAGCGATATGACCGGCTATGTGCAGATGCACTTCATCAGCAAGAACAATGCGGTAAGAGAGGCTATTTTC GGCTCCGAATGGAACAGTATGCCGCCTAACAGCTGGCAGAAATACAAAAAGGCTATAAGTGGAACGACACAGGAAACCAC CGGACATAAAATCTGTGACCTGATCGAAAAGAACTTCAAGGTTGAAGATGATGAAGGCTATGTGGATGGTGATGTGCGTG TTCGCTTTGAAAGTGTTATTGAGTTTCCATACTTCCTGCTGCATACGCTGAAGGTCTATGTGAGTCTTTACGGTGTCACC CATGAAATAGCAACTTCAAAAATCGTGGATGAACTCTTGGATGATAAGAAGCTCCTTGATGCGTTCAACAGAGTTGTATC CTGCGGCATAACGGATACCGGCAGGATCGCAGACAGCAAAGAAGATTTTGCCAGAGGGTTTATTATTTGCCTGCTCAGAA CCAGATACCTGTTCGATAAGTACATCATAAAGAGAGAGTACGCAAATGACAGCGCTGATGGCGAATGGAGCTTGAAGAGC CTGTATGTTTCCGGACAGCAATCGAAGAAGAAAGCATATTACGGGAACTCCGAGTTCACCCGTTCCGGCGAATGGACAAA TGATTGGCGAACCAAGACCAATATTATGATGCAGTCCGCCTTGCGTGTTTCCTACACTTCCCCAAAGGTAATGCACTGGA TTACCAAACTCTTGATATGGCTTTCGGAAGCTGATTGCAAGAATATCAAAAATGATGCCATTACAAAGTTTGATAAAGTT GCCGAAAACATCGCTATTGATGCAGTAAGGGAAAACTTCTTTCAGGTTTGTTCGAACGGCGTGTATGCGATGGGTGTCAA TACTCCGCATATTGTCTTTAACTACCTGGATTACTTGCTGTGGAATGACGACCGGAACGGAAAGAAGAAGAAATACAGCG ACTTTGTTTTTGAATTTAGAAATTCCGTAGAGCATTGGTATCCGCAGAATCCATCTGAGGGAACATTCGAGCAATGGAAG GATGGTGTTGACCAGTTTGGAAATCTCTGTATCATTCAGAGAAATGTGAACTCCAAATTTTCTAATATGTCTCCGGAAGC AAAGAAAAGTACATTTAAGGATATGATAGTCAAGGGGAGTATTAAACTTCGCATTATGAGTGAACTGACAGAAAAAAACG GCGACAAACCAGCCAGCCTTTACTGGAAGGAAAGGGCGTACAAGGCGCATGAAGAAGAAATGCTTGGCCATTTGAAAAAA GCTTGCAACATTGAGTAA
Upstream 100 bases:
>100_bases GATTGCAGATAAAGGTACGGAGAGGACCGGACAGCCCATCCAATAGGATAGACTTGTTGTATGACACGATCAAAGAAATC AATGGATATGGAGGTGCGGA
Downstream 100 bases:
>100_bases GCAAAGAAGCCATAGCGACAACTCCAGGCGAGAGAGTGACAGCTATGGCTTTTCTTTACACTTCAGCGTTGAAATGCCAA ACCTTGGCGGGTATTTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 645; Mature: 644
Protein sequence:
>645_residues MSKLVTELHIIGENGNMFDTDMEYIIPLYQRAYAWEDKQLTQLIEDINDVAEDSNYYIGSLIVSKQFGRYEVVDGQQRLT SLYLLLNCLGIKTKPTLTFACREKSNYTLRNIEELLLENRSKIDMDRIEPGIQRGIRILSHELTKDHFDRESFMEKLAKI IVYRIEVPENTDLNRYYEIMNTRGEQLEQHDILKATLMSYLSDDSEKGLFAKIWDACSDMTGYVQMHFISKNNAVREAIF GSEWNSMPPNSWQKYKKAISGTTQETTGHKICDLIEKNFKVEDDEGYVDGDVRVRFESVIEFPYFLLHTLKVYVSLYGVT HEIATSKIVDELLDDKKLLDAFNRVVSCGITDTGRIADSKEDFARGFIICLLRTRYLFDKYIIKREYANDSADGEWSLKS LYVSGQQSKKKAYYGNSEFTRSGEWTNDWRTKTNIMMQSALRVSYTSPKVMHWITKLLIWLSEADCKNIKNDAITKFDKV AENIAIDAVRENFFQVCSNGVYAMGVNTPHIVFNYLDYLLWNDDRNGKKKKYSDFVFEFRNSVEHWYPQNPSEGTFEQWK DGVDQFGNLCIIQRNVNSKFSNMSPEAKKSTFKDMIVKGSIKLRIMSELTEKNGDKPASLYWKERAYKAHEEEMLGHLKK ACNIE
Sequences:
>Translated_645_residues MSKLVTELHIIGENGNMFDTDMEYIIPLYQRAYAWEDKQLTQLIEDINDVAEDSNYYIGSLIVSKQFGRYEVVDGQQRLT SLYLLLNCLGIKTKPTLTFACREKSNYTLRNIEELLLENRSKIDMDRIEPGIQRGIRILSHELTKDHFDRESFMEKLAKI IVYRIEVPENTDLNRYYEIMNTRGEQLEQHDILKATLMSYLSDDSEKGLFAKIWDACSDMTGYVQMHFISKNNAVREAIF GSEWNSMPPNSWQKYKKAISGTTQETTGHKICDLIEKNFKVEDDEGYVDGDVRVRFESVIEFPYFLLHTLKVYVSLYGVT HEIATSKIVDELLDDKKLLDAFNRVVSCGITDTGRIADSKEDFARGFIICLLRTRYLFDKYIIKREYANDSADGEWSLKS LYVSGQQSKKKAYYGNSEFTRSGEWTNDWRTKTNIMMQSALRVSYTSPKVMHWITKLLIWLSEADCKNIKNDAITKFDKV AENIAIDAVRENFFQVCSNGVYAMGVNTPHIVFNYLDYLLWNDDRNGKKKKYSDFVFEFRNSVEHWYPQNPSEGTFEQWK DGVDQFGNLCIIQRNVNSKFSNMSPEAKKSTFKDMIVKGSIKLRIMSELTEKNGDKPASLYWKERAYKAHEEEMLGHLKK ACNIE >Mature_644_residues SKLVTELHIIGENGNMFDTDMEYIIPLYQRAYAWEDKQLTQLIEDINDVAEDSNYYIGSLIVSKQFGRYEVVDGQQRLTS LYLLLNCLGIKTKPTLTFACREKSNYTLRNIEELLLENRSKIDMDRIEPGIQRGIRILSHELTKDHFDRESFMEKLAKII VYRIEVPENTDLNRYYEIMNTRGEQLEQHDILKATLMSYLSDDSEKGLFAKIWDACSDMTGYVQMHFISKNNAVREAIFG SEWNSMPPNSWQKYKKAISGTTQETTGHKICDLIEKNFKVEDDEGYVDGDVRVRFESVIEFPYFLLHTLKVYVSLYGVTH EIATSKIVDELLDDKKLLDAFNRVVSCGITDTGRIADSKEDFARGFIICLLRTRYLFDKYIIKREYANDSADGEWSLKSL YVSGQQSKKKAYYGNSEFTRSGEWTNDWRTKTNIMMQSALRVSYTSPKVMHWITKLLIWLSEADCKNIKNDAITKFDKVA ENIAIDAVRENFFQVCSNGVYAMGVNTPHIVFNYLDYLLWNDDRNGKKKKYSDFVFEFRNSVEHWYPQNPSEGTFEQWKD GVDQFGNLCIIQRNVNSKFSNMSPEAKKSTFKDMIVKGSIKLRIMSELTEKNGDKPASLYWKERAYKAHEEEMLGHLKKA CNIE
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75058; Mature: 74927
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVTELHIIGENGNMFDTDMEYIIPLYQRAYAWEDKQLTQLIEDINDVAEDSNYYIGS CCCCEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEH LIVSKQFGRYEVVDGQQRLTSLYLLLNCLGIKTKPTLTFACREKSNYTLRNIEELLLENR EEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCC SKIDMDRIEPGIQRGIRILSHELTKDHFDRESFMEKLAKIIVYRIEVPENTDLNRYYEIM CCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH NTRGEQLEQHDILKATLMSYLSDDSEKGLFAKIWDACSDMTGYVQMHFISKNNAVREAIF HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH GSEWNSMPPNSWQKYKKAISGTTQETTGHKICDLIEKNFKVEDDEGYVDGDVRVRFESVI CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCHHEEHHHHHH EFPYFLLHTLKVYVSLYGVTHEIATSKIVDELLDDKKLLDAFNRVVSCGITDTGRIADSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCH EDFARGFIICLLRTRYLFDKYIIKREYANDSADGEWSLKSLYVSGQQSKKKAYYGNSEFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHEEECCCHHCCHHCCCCCCCC RSGEWTNDWRTKTNIMMQSALRVSYTSPKVMHWITKLLIWLSEADCKNIKNDAITKFDKV CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH AENIAIDAVRENFFQVCSNGVYAMGVNTPHIVFNYLDYLLWNDDRNGKKKKYSDFVFEFR HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH NSVEHWYPQNPSEGTFEQWKDGVDQFGNLCIIQRNVNSKFSNMSPEAKKSTFKDMIVKGS HHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHCCC IKLRIMSELTEKNGDKPASLYWKERAYKAHEEEMLGHLKKACNIE EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKLVTELHIIGENGNMFDTDMEYIIPLYQRAYAWEDKQLTQLIEDINDVAEDSNYYIGS CCCEEEEEEECCCCCEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEH LIVSKQFGRYEVVDGQQRLTSLYLLLNCLGIKTKPTLTFACREKSNYTLRNIEELLLENR EEECCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCC SKIDMDRIEPGIQRGIRILSHELTKDHFDRESFMEKLAKIIVYRIEVPENTDLNRYYEIM CCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHH NTRGEQLEQHDILKATLMSYLSDDSEKGLFAKIWDACSDMTGYVQMHFISKNNAVREAIF HCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH GSEWNSMPPNSWQKYKKAISGTTQETTGHKICDLIEKNFKVEDDEGYVDGDVRVRFESVI CCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEECCHHEEHHHHHH EFPYFLLHTLKVYVSLYGVTHEIATSKIVDELLDDKKLLDAFNRVVSCGITDTGRIADSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCH EDFARGFIICLLRTRYLFDKYIIKREYANDSADGEWSLKSLYVSGQQSKKKAYYGNSEFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHEEECCCHHCCHHCCCCCCCC RSGEWTNDWRTKTNIMMQSALRVSYTSPKVMHWITKLLIWLSEADCKNIKNDAITKFDKV CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHH AENIAIDAVRENFFQVCSNGVYAMGVNTPHIVFNYLDYLLWNDDRNGKKKKYSDFVFEFR HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHH NSVEHWYPQNPSEGTFEQWKDGVDQFGNLCIIQRNVNSKFSNMSPEAKKSTFKDMIVKGS HHHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHCCCCCHHHHHHHHHHHHCCC IKLRIMSELTEKNGDKPASLYWKERAYKAHEEEMLGHLKKACNIE EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA