| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is ispG [H]
Identifier: 213691675
GI number: 213691675
Start: 903966
End: 905189
Strand: Direct
Name: ispG [H]
Synonym: Blon_0780
Alternate gene names: 213691675
Gene position: 903966-905189 (Clockwise)
Preceding gene: 213691674
Following gene: 213691676
Centisome position: 31.91
GC content: 63.56
Gene sequence:
>1224_bases ATGATGAATACCTTGAATACGGAAAATCCCATCGAAAAGCCGTTCCGCAAAACCGGTGATCCGGTCGATCTGACCAGCGA ATCGCCCTTGCACCCGCGCCGCAAGTCCCGTCGCATCATGGTGGGTCCGGTGCCGGTCGGCGGTGGCGCCCCCATCTCCG TGCAGTCGATGACCAACACGCTCACGGCCGACGTGCCTGCCACGTTGCAGCAGATCGCCGAACTGACCGCCGCCGGCTGC GACATCGTGCGCGTGGCCGTGCCGAGTCAGGACGATGCCGACGCGCTGCCGGAAATCTGCCGCAAATCGCCGATTCCGGT CATCGCCGATATCCACTTCCAGTCCAAATACGTGTTCCAGGCCATCGACGCCGGCTGCGCGGCCGTGCGCGTGAACCCCG GCAACATCCGTAAGTTCGACGAAGTCGGCCCGGACATCTGCAAGGCCGCCACAGACGCGGGCATCTCGCTGCGTATCGGC GTGAACGCCGGCTCGCTGGACAAGGACCTGTACGCCAAATACGGTGGCCCGACTCCGGAAGCGCTGGTGGCCTCCGCCTT GAAGGAAGCGCACATGTTCGAGGACGTCGGCTTCCACGATTTCAAGATCTCCGTCAAACACCATGACGTCATCACCATGG TCGAAACGTACCGATTGCTCGCATCCAAGGGCGACTGGCCGCTGCACCTCGGCGTCACCGAAGCCGGCCCCGCCTGGCAA GGCACCATCAAATCCTGCCTGGCGTTCGGCGCGCTCTTGGCCGAGGGCATTGGCGACACGATTCGCGTGTCCCTCTCCGC GCCGCCGGTCGAAGAGGTCAAGGTGGGTTGCAAACTCTTGGAATACATGGGATTGCGCCCCCGCAAGTTCGACATCATCT CCTGCCCGAGCTGCGGCCGCGCCCAAGTGGACGTGATCCAGCTCGCCTCCGCCGTCACCGAAGGCCTGAAGGACGTGACC GCGCCGATCCGAGTGGCTGTTATGGGCTGCATCGTCAACGGTCCGGGCGAGGCGCGCGAAGCCGACCTCGGCGTGGCCTC CGGCAACGGCAAAGGGCAGATCTTCATCAAAGGCAAGGTCATCAAGACCGTGCCCGAGGATCAGATCGTCGACACGCTGC TCACCATAGCGAACGATATCGCCGCCCAGATGGAGGCCGACGGCCAAGTGCCAGTCAATTCCACCGGCCCGGTAGTGGTT CCAATCCAGCATCCCGGTCACTGA
Upstream 100 bases:
>100_bases ACGCCGAGCTTCGTGGTAACCCGCTGTTCACGGACGTGGAGGAAATGAACCAACTTGAGCTTGAAGCCCGCCGACGCGCC GACGACCTGATAAACAAGCA
Downstream 100 bases:
>100_bases TTCGGCCGAATAGGCCCTCGGCATAAATATCGCGGTCAGATTACAATAGCGCACGTGTCGCAAGAAGAAGAGCATCGCCG TACTGTTCGATCCAAGCCGT
Product: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MMNTLNTENPIEKPFRKTGDPVDLTSESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNTLTADVPATLQQIAELTAAGC DIVRVAVPSQDDADALPEICRKSPIPVIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFDEVGPDICKAATDAGISLRIG VNAGSLDKDLYAKYGGPTPEALVASALKEAHMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQ GTIKSCLAFGALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVT APIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIKTVPEDQIVDTLLTIANDIAAQMEADGQVPVNSTGPVVV PIQHPGH
Sequences:
>Translated_407_residues MMNTLNTENPIEKPFRKTGDPVDLTSESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNTLTADVPATLQQIAELTAAGC DIVRVAVPSQDDADALPEICRKSPIPVIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFDEVGPDICKAATDAGISLRIG VNAGSLDKDLYAKYGGPTPEALVASALKEAHMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQ GTIKSCLAFGALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVT APIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIKTVPEDQIVDTLLTIANDIAAQMEADGQVPVNSTGPVVV PIQHPGH >Mature_407_residues MMNTLNTENPIEKPFRKTGDPVDLTSESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNTLTADVPATLQQIAELTAAGC DIVRVAVPSQDDADALPEICRKSPIPVIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFDEVGPDICKAATDAGISLRIG VNAGSLDKDLYAKYGGPTPEALVASALKEAHMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQ GTIKSCLAFGALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGRAQVDVIQLASAVTEGLKDVT APIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIKTVPEDQIVDTLLTIANDIAAQMEADGQVPVNSTGPVVV PIQHPGH
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=369, Percent_Identity=45.5284552845528, Blast_Score=330, Evalue=1e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 43039; Mature: 43039
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNTLNTENPIEKPFRKTGDPVDLTSESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNT CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCEEHHHHHHH LTADVPATLQQIAELTAAGCDIVRVAVPSQDDADALPEICRKSPIPVIADIHFQSKYVFQ HCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHH AIDAGCAAVRVNPGNIRKFDEVGPDICKAATDAGISLRIGVNAGSLDKDLYAKYGGPTPE HHCCCCEEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCHH ALVASALKEAHMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQ HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH GTIKSCLAFGALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGR HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC AQVDVIQLASAVTEGLKDVTAPIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKV CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEE IKTVPEDQIVDTLLTIANDIAAQMEADGQVPVNSTGPVVVPIQHPGH EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC >Mature Secondary Structure MMNTLNTENPIEKPFRKTGDPVDLTSESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNT CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCCEEHHHHHHH LTADVPATLQQIAELTAAGCDIVRVAVPSQDDADALPEICRKSPIPVIADIHFQSKYVFQ HCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHH AIDAGCAAVRVNPGNIRKFDEVGPDICKAATDAGISLRIGVNAGSLDKDLYAKYGGPTPE HHCCCCEEEEECCCCCCCHHHCCHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCHH ALVASALKEAHMFEDVGFHDFKISVKHHDVITMVETYRLLASKGDWPLHLGVTEAGPAWQ HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH GTIKSCLAFGALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGR HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC AQVDVIQLASAVTEGLKDVTAPIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKV CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCEEECCCCCEEEEEECEE IKTVPEDQIVDTLLTIANDIAAQMEADGQVPVNSTGPVVVPIQHPGH EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12381787 [H]