| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691676
Identifier: 213691676
GI number: 213691676
Start: 905310
End: 907022
Strand: Direct
Name: 213691676
Synonym: Blon_0781
Alternate gene names: NA
Gene position: 905310-907022 (Clockwise)
Preceding gene: 213691675
Following gene: 213691677
Centisome position: 31.96
GC content: 64.21
Gene sequence:
>1713_bases ATGGTCAGCCTGCCCATCTTCATCATCCTGCTCGGCGTGATGGTCTGCATCTCCAATCTGACCACGGTCCCTTGGAACAT CGAGCCCACCGGTCAGTCGATGGCCACGCTCACCGACGACACCAAGGTCACCTTCGACAACCCGTCCGGAGAAACGCTGT CGGTGCGGGGCGCATATGAGGTCGATGAGCGGTACGTCACGCTGAACATGACCGACGATGGCGAGCTGACCGATGAGCCG GGCGCGCAAGGCAAAGCCAACAAGGATGGCATCCAGGCCATCAGGGTGCTGATTCGGGCGCCGAGGAACGCGCCGGGCGC GCGACCGGGCGTGGTGTTCATGCACGGCGCCGGCTTCGGCACCTGCGACAATTCCTTCGGCGACGTGGCTTCCGACATGG CCTCGGCCGGATTCGTGACCGCCGTGATTGACAAGCCCGTGTGGAACACCACCGACGTCACGCGCGACTATCCGGCATCC GCCAAAGCCTACGATAAGGTCATCGACTATCTGCGGGCCCAGAACGACGTCGACGCCGCCAAGGTGGGCATCTACGCCAC CTCCGAATCGACGTGGATTTCCTCGTATCTCCTGCAGGACGACCCGAATATCGCCTTCCAGATCCTCCTGAGCCCGATGG TGTTCAGTCCACGTCAATCGCTGGGATTCTTCATCACGCAGGACTTCACCCTCGTCGGCGCGAACAAAGGCTACCAGTCC ATCGTCCAGCGCGTGTTCAGCGCGGACACCGCCCTGTTCGGACTGACCAATCTCGATCTCGACACGCTCAGGCCGGCCGC CTACGCCGTGCCCACCTACGTGGCGTACGGTTCGAAGGACGTGATGACCGCACAGGTCGACGGTGTGCGGGCGATTCTCG ACAACGCCCACAAGGCCGGCAATTGGAACGTCACCATACGCAGCTATCCGGTCGCCAACCATGTGCTGCGCCTGGGAGAC GAATCCCAGGCCGGCACCCCGTTTGCCGACGCCTATGTCGACGATCTGATCGACTGGGCCGTCGGCACTTCGGCCGGACT CACGCAGACCAGCGAGAAGGCAGGCGGCACCGACCTGTATCAATCGGTCGGCCTGCCGGGCGCCCTGAAACCCCGCCGCG CCGGCACCATCTACGGGGTGATCCTGCATGCCGCAGTGATGCTGCTGCTGTTGGCGTCCATCGTACTGTCGCTGGTGGCG TTGGGCCGCAAGGCCTCGGCAGACATCCGGTGGCGGCGGGACAGGCGTGAGGCCAAGCGTGCGGGCATGCCGGTGCCGAG ACGTCCCGAGGTGCTGGGCTTCGTCCACGGTTTCGGCAATGCGCTGCTGACGTTGACCCTCACCACGCTCGCCACGCTGC TCATCTTCGGTGCGGGCCTCGGCCAGGTGATCATGGGCGTGGTCAGACTCGCGTGGGGCGGCGCACCCACGGAGACGCCG GGCGTCATGTACTGGAGCTGGCCGGTCATCCAAGTGGTGTCGGTGCTGGTGTTGTGGGCGTGGTCCCGTGTGTTCATGCA CCTGATCGAAGTCGCCTCCATCCGCGGCTTGATTCAGCTGCCTCCTCGGCGTGAATCCGTGCGGGACATCGTCACCGGTA CCGATCCGGTGCTTGCCTCCACCCGCCTGGGCCGGATCCTGTTCTGGCTGGTGGCGTTCACCATGCTGTGCATACTCCTG GTGTTCGCCTTCTGGGGACTGTTCGTCTACTGA
Upstream 100 bases:
>100_bases GCATAAATATCGCGGTCAGATTACAATAGCGCACGTGTCGCAAGAAGAAGAGCATCGCCGTACTGTTCGATCCAAGCCGT GGACCAGCGTCCATCGGCTG
Downstream 100 bases:
>100_bases TCGACGACGCCGGGTGCCCGCCGTTCACCGGGTCCCGCCGCAAGGGGAACGAAATGTCACTGTACCGAGATGAAGGCGTG GTGTTACGCACGTCCAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MVSLPIFIILLGVMVCISNLTTVPWNIEPTGQSMATLTDDTKVTFDNPSGETLSVRGAYEVDERYVTLNMTDDGELTDEP GAQGKANKDGIQAIRVLIRAPRNAPGARPGVVFMHGAGFGTCDNSFGDVASDMASAGFVTAVIDKPVWNTTDVTRDYPAS AKAYDKVIDYLRAQNDVDAAKVGIYATSESTWISSYLLQDDPNIAFQILLSPMVFSPRQSLGFFITQDFTLVGANKGYQS IVQRVFSADTALFGLTNLDLDTLRPAAYAVPTYVAYGSKDVMTAQVDGVRAILDNAHKAGNWNVTIRSYPVANHVLRLGD ESQAGTPFADAYVDDLIDWAVGTSAGLTQTSEKAGGTDLYQSVGLPGALKPRRAGTIYGVILHAAVMLLLLASIVLSLVA LGRKASADIRWRRDRREAKRAGMPVPRRPEVLGFVHGFGNALLTLTLTTLATLLIFGAGLGQVIMGVVRLAWGGAPTETP GVMYWSWPVIQVVSVLVLWAWSRVFMHLIEVASIRGLIQLPPRRESVRDIVTGTDPVLASTRLGRILFWLVAFTMLCILL VFAFWGLFVY
Sequences:
>Translated_570_residues MVSLPIFIILLGVMVCISNLTTVPWNIEPTGQSMATLTDDTKVTFDNPSGETLSVRGAYEVDERYVTLNMTDDGELTDEP GAQGKANKDGIQAIRVLIRAPRNAPGARPGVVFMHGAGFGTCDNSFGDVASDMASAGFVTAVIDKPVWNTTDVTRDYPAS AKAYDKVIDYLRAQNDVDAAKVGIYATSESTWISSYLLQDDPNIAFQILLSPMVFSPRQSLGFFITQDFTLVGANKGYQS IVQRVFSADTALFGLTNLDLDTLRPAAYAVPTYVAYGSKDVMTAQVDGVRAILDNAHKAGNWNVTIRSYPVANHVLRLGD ESQAGTPFADAYVDDLIDWAVGTSAGLTQTSEKAGGTDLYQSVGLPGALKPRRAGTIYGVILHAAVMLLLLASIVLSLVA LGRKASADIRWRRDRREAKRAGMPVPRRPEVLGFVHGFGNALLTLTLTTLATLLIFGAGLGQVIMGVVRLAWGGAPTETP GVMYWSWPVIQVVSVLVLWAWSRVFMHLIEVASIRGLIQLPPRRESVRDIVTGTDPVLASTRLGRILFWLVAFTMLCILL VFAFWGLFVY >Mature_570_residues MVSLPIFIILLGVMVCISNLTTVPWNIEPTGQSMATLTDDTKVTFDNPSGETLSVRGAYEVDERYVTLNMTDDGELTDEP GAQGKANKDGIQAIRVLIRAPRNAPGARPGVVFMHGAGFGTCDNSFGDVASDMASAGFVTAVIDKPVWNTTDVTRDYPAS AKAYDKVIDYLRAQNDVDAAKVGIYATSESTWISSYLLQDDPNIAFQILLSPMVFSPRQSLGFFITQDFTLVGANKGYQS IVQRVFSADTALFGLTNLDLDTLRPAAYAVPTYVAYGSKDVMTAQVDGVRAILDNAHKAGNWNVTIRSYPVANHVLRLGD ESQAGTPFADAYVDDLIDWAVGTSAGLTQTSEKAGGTDLYQSVGLPGALKPRRAGTIYGVILHAAVMLLLLASIVLSLVA LGRKASADIRWRRDRREAKRAGMPVPRRPEVLGFVHGFGNALLTLTLTTLATLLIFGAGLGQVIMGVVRLAWGGAPTETP GVMYWSWPVIQVVSVLVLWAWSRVFMHLIEVASIRGLIQLPPRRESVRDIVTGTDPVLASTRLGRILFWLVAFTMLCILL VFAFWGLFVY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61790; Mature: 61790
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLPIFIILLGVMVCISNLTTVPWNIEPTGQSMATLTDDTKVTFDNPSGETLSVRGAYE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEECCEE VDERYVTLNMTDDGELTDEPGAQGKANKDGIQAIRVLIRAPRNAPGARPGVVFMHGAGFG ECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC TCDNSFGDVASDMASAGFVTAVIDKPVWNTTDVTRDYPASAKAYDKVIDYLRAQNDVDAA CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH KVGIYATSESTWISSYLLQDDPNIAFQILLSPMVFSPRQSLGFFITQDFTLVGANKGYQS HEEEEECCCCHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHCCEEEEECEEEEECCCCHHH IVQRVFSADTALFGLTNLDLDTLRPAAYAVPTYVAYGSKDVMTAQVDGVRAILDNAHKAG HHHHHHHCCHHHEEECCCCHHHCCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCCC NWNVTIRSYPVANHVLRLGDESQAGTPFADAYVDDLIDWAVGTSAGLTQTSEKAGGTDLY CEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH QSVGLPGALKPRRAGTIYGVILHAAVMLLLLASIVLSLVALGRKASADIRWRRDRREAKR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AGMPVPRRPEVLGFVHGFGNALLTLTLTTLATLLIFGAGLGQVIMGVVRLAWGGAPTETP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC GVMYWSWPVIQVVSVLVLWAWSRVFMHLIEVASIRGLIQLPPRRESVRDIVTGTDPVLAS CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCHHHH TRLGRILFWLVAFTMLCILLVFAFWGLFVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSLPIFIILLGVMVCISNLTTVPWNIEPTGQSMATLTDDTKVTFDNPSGETLSVRGAYE CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCEEEEECCEE VDERYVTLNMTDDGELTDEPGAQGKANKDGIQAIRVLIRAPRNAPGARPGVVFMHGAGFG ECCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCC TCDNSFGDVASDMASAGFVTAVIDKPVWNTTDVTRDYPASAKAYDKVIDYLRAQNDVDAA CCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHH KVGIYATSESTWISSYLLQDDPNIAFQILLSPMVFSPRQSLGFFITQDFTLVGANKGYQS HEEEEECCCCHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHCCEEEEECEEEEECCCCHHH IVQRVFSADTALFGLTNLDLDTLRPAAYAVPTYVAYGSKDVMTAQVDGVRAILDNAHKAG HHHHHHHCCHHHEEECCCCHHHCCCHHHHHHHHEEECCCCCEEEHHHHHHHHHHCCCCCC NWNVTIRSYPVANHVLRLGDESQAGTPFADAYVDDLIDWAVGTSAGLTQTSEKAGGTDLY CEEEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH QSVGLPGALKPRRAGTIYGVILHAAVMLLLLASIVLSLVALGRKASADIRWRRDRREAKR HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH AGMPVPRRPEVLGFVHGFGNALLTLTLTTLATLLIFGAGLGQVIMGVVRLAWGGAPTETP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCC GVMYWSWPVIQVVSVLVLWAWSRVFMHLIEVASIRGLIQLPPRRESVRDIVTGTDPVLAS CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCHHHH TRLGRILFWLVAFTMLCILLVFAFWGLFVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA