| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691576
Identifier: 213691576
GI number: 213691576
Start: 781440
End: 784001
Strand: Reverse
Name: 213691576
Synonym: Blon_0680
Alternate gene names: NA
Gene position: 784001-781440 (Counterclockwise)
Preceding gene: 213691577
Following gene: 213691575
Centisome position: 27.68
GC content: 60.58
Gene sequence:
>2562_bases ATGACTACTGAACAGGATCAGTCCACTACGGAAGATCGCCCGGACAAGGCGACCTCCTCCACTACCGACCGGCCGATCGC CTCTGGTGACGGCCGGTCGGCCAGTTTTGCTGTCAGCGGAACGGACAGCTCGACAACCGACGGCAGCAACGATTCCGGAC CATACATCGACGACATCGCCCCGCGCCGCACGCGCGACTTCGGCGACCTGACCCGAGCCAGTCTGTCGCTATTGATGGCC GCCGTGGTTATGGTGTTCGCCGTATATCTGGGCGGCATGACGCGCGGCGTCGAATCCGACGCGCATACCGCCGCCCAAGC CATCAACTGGCTGGCCGCTTTCCCCTCCACCGTACTGACGCAGCTGGCCACCATCGTCATCGTGATCATCGTGCTCGCTC AATTGCTACTGGCCCGGGAATGGCTGCAGGCTGCGGTGTCCGCGCTGGCCATGTTTGCCGGATACGGCATTGTGTGGGTC ATATCGACGGCAATCAGTAGTCTGAACGATGCCGCCCTGCCAATGGCACTGGTCTCAGCCGCCACCTCATACGGTTCCGA GCTGTTGCCCGACATCTACGCCGGCATGGCGTCCTTCCTGACCGCCGCCGGGCCACGCCGTACCCGCTCCACGGTCAAAT GGAGTTGGAATATCCTGTATGCCATCGCCGCGGTGATGGTGGTGCTTTCGTGGCATTCGGTTACCGGCATGCTGGTTTCG ATGGCCGCCGGTCGCACGGTGGGCATGCTTATTCGATTCGTGGTCGGCACGCAGAATAAAGGCGTGTGGGGCAAAGATCT CGTCGCGGTGCTCTCAAGCATCGGATTAGAGACCACCTCACTCATCCGGCATCAGGAGCCCGGAATCGGCCATGGCTCAT TGTCTGCCACTTTGGATGACGATTTGGCGGAAGGCTCACGCATCTACGATGTGGAGACCTCGAATAACCGCCGGTTCATC GTTTCCGTCATCGACGCGCAAACCCATACCGTCGGCTATCTGAAGCAACTCTGGGATTGGGTACGTTTTACCAGCGTGTC CATTCGACGCGATCGTTCCGTGCGCGACGCCGTTCAGCATCACTTTGCCATGCTGCTCGGCCTGCACAATATCAAACTGC CTGCGCCCGCCCCCTACGGCATCGCCGATACGGACGAGTCCGCGATTCTGGTGCTGGATGCGCACACCATCGAGATGCCC GCCAATCTGAACACGCTCACCCAGGCGGACGCCGTAGCATATATGCGATATCTGTCTGTGGCGAATCGCCGTGGATATAC GCACCGGCGCATCACGCCTGATACGCTCGCTAGGCTTGAAGATGGCACTGCGGTTATCGCCGGCTGGCTGAATGGCGACA ACGCTTCCGGCCCGGCCAATACCGCGCTTGACAAGGTCCAGTTGCTTGCGCTGTTCGCCGCGTTGATCGGCGTGAAACCT GCAGTCGCGGCTGCCCGTGAATCTTGGGGCGACACGACGTTGACCGCGCTGGCCCCGTTCATCCAGAAAGTCGCGGTTCC CTCCCCCACACGCGCATTGGTCACATGGGACAAGCAGCTGCTCAAGGAACTGCGAGACCACATCAACACCATAATTGATG AGGAGACCGCCGAATCCGCCGAGCCGGTGACGCTTGCCCGCTTCTCCTGGCGTTCGATGATCACCATGCTGCTGGTCATC GTGGCTGTGGTCGTGGTCTTCACCCAGTTGAAGCCCGAAGAAATCATAACCGCGCTGACCAACGCCAACCCGTTGATGGC GGTGGTAACGCTCGCGTTCGGTGCCTGCGGCTGGATCGGATCGTCGATTTCGCTCGGCGCTCTCATGGATCGCAGCAAGC GAGATAACACGGGCGTGTTCATGAGTCAGGTTGCCGGCGGCTTTGCCACGGTATCCATGCCGGCCGGCGTGGGGCCCGCG TTCGTCAACCTGCAGTTTCTGCGCAGATCCGGCTATCGCAACACCCCGGCCACCGCAATCATGAGCGCCGCGCTCGTGGT GTATTACGCCGTGTACTTCTCCATGCTGGTGTTGATTGGCCTATTCACCGGCCGCAATATGTTCTCCGGCGCGATTCCGA CGAATACGTTGGTCCTTGTGCTGGGCGTAGTGGTTGTGGTGTTGTCCATTGCGATGATGATTCCGCCGTTGCGCCACTGG GTGACCCGTCGTCTTATGCCGCTGGCCAAGACGTATATCAACCAGCTGCTGGACGTGCTTTCCCAGCCCCGACAGCTCAC GGTCAGCTGCCTGGGCGCACTGTTCCAGAACACGACCACTGGGCTCGCTTTCTGGGCGGCCTTGCAAGCGTTCGGTTATT CATCGAATCCGATTGAAACGACGTTCGTCTTCATGCTGGCCTATGCGTTGGGTTCCGCGGTGCCCACCCCCGGTGGTTTG GGCGGTGTGGAAGCCGCGTTGACTTTCGCATTCGTGGCGGTCGGTGTGCCTCAGGGCGTAGCTCTATCCGCCACGTTGCT GCATCGCGTGGTGTTCTATTGGCTACGAATTCCTCTGGGCGCAGCCGCTATGAAGTGGCTCGACCGTCATAACCTCGTCT GA
Upstream 100 bases:
>100_bases CGAGTCCCTCGAATCCCTCGCATCCACCACACTACTGCGCTGAGTCACAAACCGAACCGCAAACTGAACCGAACAAGGAC AGACGTCAGGTAACCATTTC
Downstream 100 bases:
>100_bases TCTGTCCGTTTTTGTCCATCCTGGGCTTCAGAACACGAAATAGATGTGAAAAGCCTTATACGATGCGGGTTTTCGCAGGA ACATGCGCTAGTATCATTGA
Product: narrowly conserved hypothetical membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein-Like Protein
Number of amino acids: Translated: 853; Mature: 852
Protein sequence:
>853_residues MTTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIAPRRTRDFGDLTRASLSLLMA AVVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLTQLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWV ISTAISSLNDAALPMALVSAATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVS MAAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDDDLAEGSRIYDVETSNNRRFI VSVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQHHFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMP ANLNTLTQADAVAYMRYLSVANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKP AVAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESAEPVTLARFSWRSMITMLLVI VAVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIGSSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPA FVNLQFLRRSGYRNTPATAIMSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHW VTRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIETTFVFMLAYALGSAVPTPGGL GGVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLGAAAMKWLDRHNLV
Sequences:
>Translated_853_residues MTTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIAPRRTRDFGDLTRASLSLLMA AVVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLTQLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWV ISTAISSLNDAALPMALVSAATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVS MAAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDDDLAEGSRIYDVETSNNRRFI VSVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQHHFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMP ANLNTLTQADAVAYMRYLSVANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKP AVAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESAEPVTLARFSWRSMITMLLVI VAVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIGSSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPA FVNLQFLRRSGYRNTPATAIMSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHW VTRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIETTFVFMLAYALGSAVPTPGGL GGVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLGAAAMKWLDRHNLV >Mature_852_residues TTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIAPRRTRDFGDLTRASLSLLMAA VVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLTQLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWVI STAISSLNDAALPMALVSAATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVSM AAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDDDLAEGSRIYDVETSNNRRFIV SVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQHHFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMPA NLNTLTQADAVAYMRYLSVANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKPA VAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESAEPVTLARFSWRSMITMLLVIV AVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIGSSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPAF VNLQFLRRSGYRNTPATAIMSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHWV TRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIETTFVFMLAYALGSAVPTPGGLG GVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLGAAAMKWLDRHNLV
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91516; Mature: 91385
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC PRRTRDFGDLTRASLSLLMAAVVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWVISTAISSLNDAALPMALVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH ATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH MAAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDD HHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCH DLAEGSRIYDVETSNNRRFIVSVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQH HHHCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMPANLNTLTQADAVAYMRYLSV HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKP HHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCH AVAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCC EPVTLARFSWRSMITMLLVIVAVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC SSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPAFVNLQFLRRSGYRNTPATAI CCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH MSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHW HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH VTRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIET HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH TFVFMLAYALGSAVPTPGGLGGVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHH AAAMKWLDRHNLV HHHHHHHHHHCCC >Mature Secondary Structure TTEQDQSTTEDRPDKATSSTTDRPIASGDGRSASFAVSGTDSSTTDGSNDSGPYIDDIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC PRRTRDFGDLTRASLSLLMAAVVMVFAVYLGGMTRGVESDAHTAAQAINWLAAFPSTVLT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH QLATIVIVIIVLAQLLLAREWLQAAVSALAMFAGYGIVWVISTAISSLNDAALPMALVSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHH ATSYGSELLPDIYAGMASFLTAAGPRRTRSTVKWSWNILYAIAAVMVVLSWHSVTGMLVS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHH MAAGRTVGMLIRFVVGTQNKGVWGKDLVAVLSSIGLETTSLIRHQEPGIGHGSLSATLDD HHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCH DLAEGSRIYDVETSNNRRFIVSVIDAQTHTVGYLKQLWDWVRFTSVSIRRDRSVRDAVQH HHHCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH HFAMLLGLHNIKLPAPAPYGIADTDESAILVLDAHTIEMPANLNTLTQADAVAYMRYLSV HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ANRRGYTHRRITPDTLARLEDGTAVIAGWLNGDNASGPANTALDKVQLLALFAALIGVKP HHCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCH AVAAARESWGDTTLTALAPFIQKVAVPSPTRALVTWDKQLLKELRDHINTIIDEETAESA HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCC EPVTLARFSWRSMITMLLVIVAVVVVFTQLKPEEIITALTNANPLMAVVTLAFGACGWIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHC SSISLGALMDRSKRDNTGVFMSQVAGGFATVSMPAGVGPAFVNLQFLRRSGYRNTPATAI CCCHHHHHHHCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHH MSAALVVYYAVYFSMLVLIGLFTGRNMFSGAIPTNTLVLVLGVVVVVLSIAMMIPPLRHW HHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH VTRRLMPLAKTYINQLLDVLSQPRQLTVSCLGALFQNTTTGLAFWAALQAFGYSSNPIET HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH TFVFMLAYALGSAVPTPGGLGGVEAALTFAFVAVGVPQGVALSATLLHRVVFYWLRIPLG HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHH AAAMKWLDRHNLV HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA