| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691574
Identifier: 213691574
GI number: 213691574
Start: 779866
End: 780249
Strand: Reverse
Name: 213691574
Synonym: Blon_0677
Alternate gene names: NA
Gene position: 780249-779866 (Counterclockwise)
Preceding gene: 213691575
Following gene: 213691573
Centisome position: 27.54
GC content: 62.5
Gene sequence:
>384_bases GTGACGTTCCCTGCAGGCACATTCCAACCGAACGAATCCGTCACCGTGCACTACGATGGTGCCATCGTCGCCGACGTCCA GCAGATCGCTGCAGTATCCAAGACGTTCACTGCCAAGGCAGATGGTTCCTTGACTTTGCTGTACACGTTCAAGGCCAGCC AGGCCGGCAAGACCATCGCGGTCACGGCTGTTGGCGCTGTATCCGGTACCAAGACCGCCACCATTCAGGTTCCGGCAACC GGAACCGGTGACCAGTCCGGTACCACGACTACCACCACCGCCGACACCGGTGTGGCCATCGCACCGTACGGTGTGGCCAT TGCGTTGCTTGCCGCCGCGGGCATCGCCCTGTTCGCCGCCCGCAAGAGCACCACTCGTCGCTGA
Upstream 100 bases:
>100_bases CGGCAGCGCCTTGCTCGGATACCCCAACCGGCGCATCGTGCGGCTCGCCCGCCGCCCGTGCGTCAGATAATGGTCCACTT ACAGCGGCACCACCGCTACC
Downstream 100 bases:
>100_bases CGTGACTGACATAATGGACGGTAGACGCTGAAGCATAGTTCGCGAATACCACTGAACCGGGAGTCGATGATTCCCGGTTT TTCCATGTTATTGCTACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTFPAGTFQPNESVTVHYDGAIVADVQQIAAVSKTFTAKADGSLTLLYTFKASQAGKTIAVTAVGAVSGTKTATIQVPAT GTGDQSGTTTTTTADTGVAIAPYGVAIALLAAAGIALFAARKSTTRR
Sequences:
>Translated_127_residues MTFPAGTFQPNESVTVHYDGAIVADVQQIAAVSKTFTAKADGSLTLLYTFKASQAGKTIAVTAVGAVSGTKTATIQVPAT GTGDQSGTTTTTTADTGVAIAPYGVAIALLAAAGIALFAARKSTTRR >Mature_126_residues TFPAGTFQPNESVTVHYDGAIVADVQQIAAVSKTFTAKADGSLTLLYTFKASQAGKTIAVTAVGAVSGTKTATIQVPATG TGDQSGTTTTTTADTGVAIAPYGVAIALLAAAGIALFAARKSTTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12683; Mature: 12552
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPAGTFQPNESVTVHYDGAIVADVQQIAAVSKTFTAKADGSLTLLYTFKASQAGKTIA CCCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCEEE VTAVGAVSGTKTATIQVPATGTGDQSGTTTTTTADTGVAIAPYGVAIALLAAAGIALFAA EEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHEEEE RKSTTRR CCCCCCC >Mature Secondary Structure TFPAGTFQPNESVTVHYDGAIVADVQQIAAVSKTFTAKADGSLTLLYTFKASQAGKTIA CCCCCCCCCCCCEEEEECCEEEEHHHHHHHHHHHEEECCCCCEEEEEEEECCCCCCEEE VTAVGAVSGTKTATIQVPATGTGDQSGTTTTTTADTGVAIAPYGVAIALLAAAGIALFAA EEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHHHEEEE RKSTTRR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA