| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691573
Identifier: 213691573
GI number: 213691573
Start: 778882
End: 779316
Strand: Reverse
Name: 213691573
Synonym: Blon_0676
Alternate gene names: NA
Gene position: 779316-778882 (Counterclockwise)
Preceding gene: 213691574
Following gene: 213691568
Centisome position: 27.51
GC content: 60.69
Gene sequence:
>435_bases ATGGCTTCATTGCTTCAGGGATTCGAAGAGGTTCAGCTGGTCAAGCCGGTGGGCAAGACCGTTCTGACCGTCACCGATTC CGCCATTCGTTTCAACAAAGCCACCGCTGAAGCGCTCGGATTCCCGGCGTACGTCAAGGTGCTGATCAACGACAAGACCA GGCAGATCGCCGTGACCCCGACCACCGCCAAGGCCGGCAACGCCATCAAGTTCAGCAAGCCCGAAGGCAAGCAGGCCGCT TCGGTAAGCGTCAAGGAAGCCACGCTCATTGAAGCAGTGAAGGCATACCTCACTCTGCCCGAGGCACCGGAAGGCGAAAT CGCCTACCAGTCCGTCAACGGTACCGCCTACCCCGAAAGCAAGACCGTGATCTTCGACGTGGCCAACGCCACCGCCGGCA CCATGAAGCGCCGCGGCCGCAAAAAGGCCGCCTGA
Upstream 100 bases:
>100_bases TTATGCAATCATGCATGCATGGATTTGTATAATACGGAATTAGCTGGCTACAATTAGCGACGTAAAAAGACACGTGACCA ATGCAATAAGGAGAGCAATT
Downstream 100 bases:
>100_bases TCTCAGGTGATTATCCTTGATTGCCGTCATCGGCAGATCAGGAATTCGGCTTGTATTTTTGAATGACTTTCACGAATACG GCGTTTTATGGAAACCGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVTPTTAKAGNAIKFSKPEGKQAA SVSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPESKTVIFDVANATAGTMKRRGRKKAA
Sequences:
>Translated_144_residues MASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVTPTTAKAGNAIKFSKPEGKQAA SVSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPESKTVIFDVANATAGTMKRRGRKKAA >Mature_143_residues ASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVTPTTAKAGNAIKFSKPEGKQAAS VSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPESKTVIFDVANATAGTMKRRGRKKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15272; Mature: 15141
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVTP CCHHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHCCCEEEEEEECCCCCEEEEEC TTAKAGNAIKFSKPEGKQAASVSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPES CCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC KTVIFDVANATAGTMKRRGRKKAA CEEEEEECCCCHHHHHHCCCCCCC >Mature Secondary Structure ASLLQGFEEVQLVKPVGKTVLTVTDSAIRFNKATAEALGFPAYVKVLINDKTRQIAVTP CHHHHHHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHCCCEEEEEEECCCCCEEEEEC TTAKAGNAIKFSKPEGKQAASVSVKEATLIEAVKAYLTLPEAPEGEIAYQSVNGTAYPES CCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCC KTVIFDVANATAGTMKRRGRKKAA CEEEEEECCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA