| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is uxaC [H]
Identifier: 213691567
GI number: 213691567
Start: 773370
End: 774800
Strand: Reverse
Name: uxaC [H]
Synonym: Blon_0669
Alternate gene names: 213691567
Gene position: 774800-773370 (Counterclockwise)
Preceding gene: 213691568
Following gene: 213691566
Centisome position: 27.35
GC content: 57.86
Gene sequence:
>1431_bases ATGGTATCCGCGCTCAATGAAGATCGCCTATTCCCAACGGATCCGGAACAACGTTTAATCGCACGTCGACTGTACGAGGC AATCAAGGATCGTCCCATCATCTCCCCTCACGGACACGTCCCTATCGACTGGTTCGCGGAAGACAAGCATTTCAAGAACC CCACCGATCTATTCATCACTCCTGATCACTACGTGACCCGTATCATGCACGGACATAGTGTTCCTTTCAGCGAGCTGGGT GTGGGCCAGAAGAACTTCACCGAAGAACAATCTCGCAACGCCTTCCGCCTCCTTGGAAAGTACTGGTATGCCTATGCTGG CACGCCGATGCGTTACTGGATGGAGGATTCGCTGTCCAATGTGTTCGGCATCAACAAGCCACTCAATGAAGACACCGCAG ACAGCATCTACGATGAGCTCAACGAGCTCCTTGCCTCCGACGATTTCACCACCCGCAAGCTTGTGAAGCGTTTCAACATC GGCTTCATCTCCACCACCGATGACCCCACCGATGACCTGGTCCTGCACGATAAGGTGCGCGCCGACGCCAATTTCCCGGC GCGTCTTGCACCGTGTTTCCGTCCGGATCGCTACCTTGCGGTCGATCGTGTGGATTGGGCTCAGCTCTGCGACCAGCTGG GTGAATCGGCTGGCGTAAACACCGCCACTTATGAAGGATTCGTAGAGGCCATGCGCCGTCGTCGTCTGTTCTTCAAGCAG CATGGCGCAGTCGCCGCCGATTACGGTGTGGATCCTTCGCTTGACGAAGTCAATTGGTCCGGCGACACCACACGCCTGTC GGATGATGTGGCGATTCGCTTGTACACCAAGGCTCGTAGTGGCAGCCTGACTTCCGATGAGGCACGCAAGCTGCACGCCC ATCTGCTCAACGACCAGGCAAAGCTCGCGCAGGACGACGGTCTGGTAATGACCTTGCACCCCGGCGTGATGCGCAACCAC TACCGCAAGCAGCTCGTCAACTACGGTCCGGACTGTGGAGCGGATTGCCCGATGCCGGCTGATTGGGCTCACTGGCTGCG CCCCATGCTCAACGAATACGGCGAGAATCCTGATTTCCACCTTGTGGCATTCACCATGGATGAGACCGCATACTCCCGCG AGCTCGCTCCAATGGCGGCATACTACCCGGCGCTGTACATCGGAGCCCCGTGGTGGTTCCTGGATGCGCCTGAGCCGATT CTGCGCTACTACGAGGATGTCGTTCCGTACGCTGGTTTCGCCAAGCTGTCGGGATTCATCGATGACACCCGTGCGCTGTG CTCCATCCCCGCCCGCCACGACATGAACCGTCGTCTGACCGCACGTTACATCTCCGGTCTGGTCGCCGACCACCGGTTGA GTTATGAGGAAGGCGAGCAGATCGCCATTCGTTCCGTGGACGGTCAGCCTTCTGACGTGTTCAAGCTCTGA
Upstream 100 bases:
>100_bases ACCCCGATCGCGTCCACCTCGACGAATCGCAATATCAGGAATTGGCGAAAGCCATCATCCAGCATCTGTGAATAAGCCTC TATTTTAAGGAGTAGTTACA
Downstream 100 bases:
>100_bases CTCGAACGACCTTTTATTGATTTCAAGGAGTAAATATGACTGATACACATGATTTCACGTCATTGCCCAGATTGAACCGC GCAGAGCACGGCCGCGCCGC
Product: Glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL
Sequences:
>Translated_476_residues MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL >Mature_476_residues MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFITPDHYVTRIMHGHSVPFSELG VGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSNVFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNI GFISTTDDPTDDLVLHDKVRADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQAKLAQDDGLVMTLHPGVMRNH YRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFHLVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPI LRYYEDVVPYAGFAKLSGFIDDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367192, Length=476, Percent_Identity=27.7310924369748, Blast_Score=158, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003766 - InterPro: IPR023177 [H]
Pfam domain/function: PF02614 UxaC [H]
EC number: =5.3.1.12 [H]
Molecular weight: Translated: 54362; Mature: 54362
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFIT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC PDHYVTRIMHGHSVPFSELGVGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSN CHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNIGFISTTDDPTDDLVLHDKVR HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHC ADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ CCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQA CCCEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH KLAQDDGLVMTLHPGVMRNHYRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFH HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE LVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPILRYYEDVVPYAGFAKLSGFI EEEEEECCHHHHHHHHHHHHHHCCCEECCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHH DDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCC >Mature Secondary Structure MVSALNEDRLFPTDPEQRLIARRLYEAIKDRPIISPHGHVPIDWFAEDKHFKNPTDLFIT CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCEEEC PDHYVTRIMHGHSVPFSELGVGQKNFTEEQSRNAFRLLGKYWYAYAGTPMRYWMEDSLSN CHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH VFGINKPLNEDTADSIYDELNELLASDDFTTRKLVKRFNIGFISTTDDPTDDLVLHDKVR HHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEHHHC ADANFPARLAPCFRPDRYLAVDRVDWAQLCDQLGESAGVNTATYEGFVEAMRRRRLFFKQ CCCCCCCHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH HGAVAADYGVDPSLDEVNWSGDTTRLSDDVAIRLYTKARSGSLTSDEARKLHAHLLNDQA CCCEEECCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCHH KLAQDDGLVMTLHPGVMRNHYRKQLVNYGPDCGADCPMPADWAHWLRPMLNEYGENPDFH HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE LVAFTMDETAYSRELAPMAAYYPALYIGAPWWFLDAPEPILRYYEDVVPYAGFAKLSGFI EEEEEECCHHHHHHHHHHHHHHCCCEECCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHH DDTRALCSIPARHDMNRRLTARYISGLVADHRLSYEEGEQIAIRSVDGQPSDVFKL HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA