| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is uxuB [H]
Identifier: 213691566
GI number: 213691566
Start: 771940
End: 773334
Strand: Reverse
Name: uxuB [H]
Synonym: Blon_0668
Alternate gene names: 213691566
Gene position: 773334-771940 (Counterclockwise)
Preceding gene: 213691567
Following gene: 213691565
Centisome position: 27.3
GC content: 60.86
Gene sequence:
>1395_bases ATGACTGATACACATGATTTCACGTCATTGCCCAGATTGAACCGCGCAGAGCACGGCCGCGCCGCAGCGCCGGTGCGCAT CATCCATCTTGGTATCGGCAATTTCACCAGGGCGCATCAAGCCTGGTACACGGAACATGCGCCGGACACCGCGCAGTGGG GCATCGCCGGTTTCACCGGACGTTCTCGCCGAATGGTCGACAAGCTGGCCCCTCAGGACAACGTCTACACGCTGATCACC TCGGCACCGGAAGGCGATTCGTTCGAAGTCATCTCTTCGATTTCATCGATGCATGAGGGCGGCGACATGGCGGCACTGCA CAAGTACTTCGCGGATCCGAACGTGTCCATCGTCACCTCCACGGTTACCGAAGCTGGATACAAAAGGAACGCCCACGGTG ATCTAGATGTCAACGACACCGACGTGTCGGAGGACCTCGCCAAACTGCGTAACGATGTGAACGTGTCCGAACTTGCCACC GTGCCTGCACGCATTGTGGCCGGGCTGGAGGCGCGTCGCGCGGCAAACGCCGGAGCGATCACTATCCTTCCCTGCGACAA CCTCGCAGGCAACGGAGCCGCGTTCCGTCGCGTCGTCGAGCAGGCCATTGAGGCCGTGGACCCCACCTTGCTGGAATGGA CTCGCGACAACGTGGCATGGGCCACTTCGATGGTCGACCGCATCACGCCGGCCACCACCGACGCCGAACTGCAGACCGTG GCACAGGACGAGGGATGGTACGACGTGGCGCCGGTGCGCACGGAACCGTTCCTCGAATGGGTCATCCGAGGCGACTTCCC GAAGGGACGTCCTGCATGGGACAAGGCCGGTGCCGTTATCACGGATGATGTGGAACCCTACGAGCAGCGCAAACTGTGGA TGCTCAATGGTTCGCATTCCACTCTCGCCTATGTCGGCCCGCTGTTCGGTCATGAGTCGGTGGCCGAGGCCATCGCTGAC CCGCAGCTGCGGGCATGGGTGAATGAATGGTGGGATCTGGCCGGATCATACCTGTCCGTCTCCAGTGACGACTACCGTGC CAAGCTGTTGGAGCGATTCTCCAATCCGCGCATTCACCATCACCTTTTCCAAATCGCCACCGATGGTTCGCAAAAGCTGC CGGTACGAATCGTGCCTGTCGCCAAGCACGCGCTTGCGGACGGTCGCGACATCACGGCTCCGGCACGTGCTGTCGCCGCA TGGATCGTGTTCCTGCGTCGATTTGGAAACACGGAGGCCAAGGACGTGAATCTCGACGAGGTGAGGAAACTTGCCGTCAA CGATGACGTCACCCCAGCCGTGTCCTACCTGGACAAGGATCTTGGCGCCAACGCCACTTTCACCAACAAGGTGAGCGAAC TCGTCAACGAGCTGTCTTCGGCGACAGCCGCGTGA
Upstream 100 bases:
>100_bases AGGAAGGCGAGCAGATCGCCATTCGTTCCGTGGACGGTCAGCCTTCTGACGTGTTCAAGCTCTGACTCGAACGACCTTTT ATTGATTTCAAGGAGTAAAT
Downstream 100 bases:
>100_bases CCACAACCATAAACATAATCAAATAACCGATAGCATAAGCTTCCTCGCCGTAGGTGGGGATTATGACGCGGACGCGCCGC GTCATAACAGGAAGGAATAA
Product: Mannitol dehydrogenase, C-terminal domain protein
Products: NA
Alternate protein names: Fructuronate reductase [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MTDTHDFTSLPRLNRAEHGRAAAPVRIIHLGIGNFTRAHQAWYTEHAPDTAQWGIAGFTGRSRRMVDKLAPQDNVYTLIT SAPEGDSFEVISSISSMHEGGDMAALHKYFADPNVSIVTSTVTEAGYKRNAHGDLDVNDTDVSEDLAKLRNDVNVSELAT VPARIVAGLEARRAANAGAITILPCDNLAGNGAAFRRVVEQAIEAVDPTLLEWTRDNVAWATSMVDRITPATTDAELQTV AQDEGWYDVAPVRTEPFLEWVIRGDFPKGRPAWDKAGAVITDDVEPYEQRKLWMLNGSHSTLAYVGPLFGHESVAEAIAD PQLRAWVNEWWDLAGSYLSVSSDDYRAKLLERFSNPRIHHHLFQIATDGSQKLPVRIVPVAKHALADGRDITAPARAVAA WIVFLRRFGNTEAKDVNLDEVRKLAVNDDVTPAVSYLDKDLGANATFTNKVSELVNELSSATAA
Sequences:
>Translated_464_residues MTDTHDFTSLPRLNRAEHGRAAAPVRIIHLGIGNFTRAHQAWYTEHAPDTAQWGIAGFTGRSRRMVDKLAPQDNVYTLIT SAPEGDSFEVISSISSMHEGGDMAALHKYFADPNVSIVTSTVTEAGYKRNAHGDLDVNDTDVSEDLAKLRNDVNVSELAT VPARIVAGLEARRAANAGAITILPCDNLAGNGAAFRRVVEQAIEAVDPTLLEWTRDNVAWATSMVDRITPATTDAELQTV AQDEGWYDVAPVRTEPFLEWVIRGDFPKGRPAWDKAGAVITDDVEPYEQRKLWMLNGSHSTLAYVGPLFGHESVAEAIAD PQLRAWVNEWWDLAGSYLSVSSDDYRAKLLERFSNPRIHHHLFQIATDGSQKLPVRIVPVAKHALADGRDITAPARAVAA WIVFLRRFGNTEAKDVNLDEVRKLAVNDDVTPAVSYLDKDLGANATFTNKVSELVNELSSATAA >Mature_463_residues TDTHDFTSLPRLNRAEHGRAAAPVRIIHLGIGNFTRAHQAWYTEHAPDTAQWGIAGFTGRSRRMVDKLAPQDNVYTLITS APEGDSFEVISSISSMHEGGDMAALHKYFADPNVSIVTSTVTEAGYKRNAHGDLDVNDTDVSEDLAKLRNDVNVSELATV PARIVAGLEARRAANAGAITILPCDNLAGNGAAFRRVVEQAIEAVDPTLLEWTRDNVAWATSMVDRITPATTDAELQTVA QDEGWYDVAPVRTEPFLEWVIRGDFPKGRPAWDKAGAVITDDVEPYEQRKLWMLNGSHSTLAYVGPLFGHESVAEAIADP QLRAWVNEWWDLAGSYLSVSSDDYRAKLLERFSNPRIHHHLFQIATDGSQKLPVRIVPVAKHALADGRDITAPARAVAAW IVFLRRFGNTEAKDVNLDEVRKLAVNDDVTPAVSYLDKDLGANATFTNKVSELVNELSSATAA
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family. UxuB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=456, Percent_Identity=35.5263157894737, Blast_Score=242, Evalue=4e-65, Organism=Escherichia coli, GI1787823, Length=394, Percent_Identity=37.3096446700508, Blast_Score=226, Evalue=2e-60, Organism=Escherichia coli, GI1788497, Length=413, Percent_Identity=33.6561743341404, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI48994885, Length=436, Percent_Identity=27.7522935779816, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790028, Length=294, Percent_Identity=25.1700680272109, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324401, Length=395, Percent_Identity=32.4050632911392, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6320765, Length=395, Percent_Identity=32.4050632911392, Blast_Score=189, Evalue=6e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.57 [H]
Molecular weight: Translated: 50869; Mature: 50738
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTHDFTSLPRLNRAEHGRAAAPVRIIHLGIGNFTRAHQAWYTEHAPDTAQWGIAGFTG CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC RSRRMVDKLAPQDNVYTLITSAPEGDSFEVISSISSMHEGGDMAALHKYFADPNVSIVTS CHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEH TVTEAGYKRNAHGDLDVNDTDVSEDLAKLRNDVNVSELATVPARIVAGLEARRAANAGAI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE TILPCDNLAGNGAAFRRVVEQAIEAVDPTLLEWTRDNVAWATSMVDRITPATTDAELQTV EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH AQDEGWYDVAPVRTEPFLEWVIRGDFPKGRPAWDKAGAVITDDVEPYEQRKLWMLNGSHS HCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCHHHCCCEEECCCCCHHCCEEEEEECCCC TLAYVGPLFGHESVAEAIADPQLRAWVNEWWDLAGSYLSVSSDDYRAKLLERFSNPRIHH CHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCHHH HLFQIATDGSQKLPVRIVPVAKHALADGRDITAPARAVAAWIVFLRRFGNTEAKDVNLDE HHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VRKLAVNDDVTPAVSYLDKDLGANATFTNKVSELVNELSSATAA HHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TDTHDFTSLPRLNRAEHGRAAAPVRIIHLGIGNFTRAHQAWYTEHAPDTAQWGIAGFTG CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC RSRRMVDKLAPQDNVYTLITSAPEGDSFEVISSISSMHEGGDMAALHKYFADPNVSIVTS CHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEH TVTEAGYKRNAHGDLDVNDTDVSEDLAKLRNDVNVSELATVPARIVAGLEARRAANAGAI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEE TILPCDNLAGNGAAFRRVVEQAIEAVDPTLLEWTRDNVAWATSMVDRITPATTDAELQTV EEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHH AQDEGWYDVAPVRTEPFLEWVIRGDFPKGRPAWDKAGAVITDDVEPYEQRKLWMLNGSHS HCCCCCEEECCCCCCHHHHHHHCCCCCCCCCCHHHCCCEEECCCCCHHCCEEEEEECCCC TLAYVGPLFGHESVAEAIADPQLRAWVNEWWDLAGSYLSVSSDDYRAKLLERFSNPRIHH CHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCHHH HLFQIATDGSQKLPVRIVPVAKHALADGRDITAPARAVAAWIVFLRRFGNTEAKDVNLDE HHHHHCCCCCCCCCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH VRKLAVNDDVTPAVSYLDKDLGANATFTNKVSELVNELSSATAA HHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]