| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691568
Identifier: 213691568
GI number: 213691568
Start: 774830
End: 775258
Strand: Reverse
Name: 213691568
Synonym: Blon_0670
Alternate gene names: NA
Gene position: 775258-774830 (Counterclockwise)
Preceding gene: 213691573
Following gene: 213691567
Centisome position: 27.37
GC content: 53.85
Gene sequence:
>429_bases ATGCCAGAGCCAGAGAAACAACTTTGCGCCTACTGCGATGAAGGCGAGGCCTTGGACGCGTTCGGCATCATAATTGCCGA ACTGCCAGCTTCGAAGCTTGTGCTGTTCAAGGAACAAAGTCATAAGGGACGTGTCATTGTTGCCTCGAAACATCATGTTT CCGAAATCGTGGACCTATCCGATGAGGAACGTGAGGCTTTCCTGAATGACGTGAACCATGTGGCAAAAGCCTTGCACGCG GCCTTCCACCCGGACAAAATCAACTACGGCGCCTACGGAGACGACGGGCACCACCTGCACTTCCACCTGTGCCCCAAGTA TCGGGACGGCTTTGAGTGGAAGACGGTGTTCGCAATGAACCCCGATCGCGTCCACCTCGACGAATCGCAATATCAGGAAT TGGCGAAAGCCATCATCCAGCATCTGTGA
Upstream 100 bases:
>100_bases GATCACTCCGACCCACGCATATATTGAAAAAGAACTTGCAAACGAACACAGCAATGTGGCCAACAGCCACATCGTTGCAG CAACTCTCAAAGGACGAGAT
Downstream 100 bases:
>100_bases ATAAGCCTCTATTTTAAGGAGTAGTTACAATGGTATCCGCGCTCAATGAAGATCGCCTATTCCCAACGGATCCGGAACAA CGTTTAATCGCACGTCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: HIT Domain-Containing Protein; Histidine Triad Family Hydrolase; Histidine Triad Domain Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPEPEKQLCAYCDEGEALDAFGIIIAELPASKLVLFKEQSHKGRVIVASKHHVSEIVDLSDEEREAFLNDVNHVAKALHA AFHPDKINYGAYGDDGHHLHFHLCPKYRDGFEWKTVFAMNPDRVHLDESQYQELAKAIIQHL
Sequences:
>Translated_142_residues MPEPEKQLCAYCDEGEALDAFGIIIAELPASKLVLFKEQSHKGRVIVASKHHVSEIVDLSDEEREAFLNDVNHVAKALHA AFHPDKINYGAYGDDGHHLHFHLCPKYRDGFEWKTVFAMNPDRVHLDESQYQELAKAIIQHL >Mature_141_residues PEPEKQLCAYCDEGEALDAFGIIIAELPASKLVLFKEQSHKGRVIVASKHHVSEIVDLSDEEREAFLNDVNHVAKALHAA FHPDKINYGAYGDDGHHLHFHLCPKYRDGFEWKTVFAMNPDRVHLDESQYQELAKAIIQHL
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16156; Mature: 16025
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPEKQLCAYCDEGEALDAFGIIIAELPASKLVLFKEQSHKGRVIVASKHHVSEIVDLS CCCCHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEECCCCCCCEEEECCHHHHHHHCCC DEEREAFLNDVNHVAKALHAAFHPDKINYGAYGDDGHHLHFHLCPKYRDGFEWKTVFAMN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEC PDRVHLDESQYQELAKAIIQHL CCEEEECHHHHHHHHHHHHHCC >Mature Secondary Structure PEPEKQLCAYCDEGEALDAFGIIIAELPASKLVLFKEQSHKGRVIVASKHHVSEIVDLS CCCHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEECCCCCCCEEEECCHHHHHHHCCC DEEREAFLNDVNHVAKALHAAFHPDKINYGAYGDDGHHLHFHLCPKYRDGFEWKTVFAMN CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEC PDRVHLDESQYQELAKAIIQHL CCEEEECHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA