| Definition | Bifidobacterium longum subsp. infantis ATCC 15697, complete genome. |
|---|---|
| Accession | NC_011593 |
| Length | 2,832,748 |
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The map label for this gene is 213691529
Identifier: 213691529
GI number: 213691529
Start: 721451
End: 722938
Strand: Direct
Name: 213691529
Synonym: Blon_0630
Alternate gene names: NA
Gene position: 721451-722938 (Clockwise)
Preceding gene: 213691528
Following gene: 213691530
Centisome position: 25.47
GC content: 51.41
Gene sequence:
>1488_bases ATGGCGATGCTGCGAGCCTACGGCTATGCCGGCGTGATTTGCGCCGGCCCGATGCTGCTGGGCGTGCTTCTGCAGTTTGG CGTGCTGATCGTGAGCAGTTGGTGGCAGGTGGGCCGCCCCGACCGTGATCTGCTTGTATGCATGATCACATACACATTGC TCTCCTCGTTGGTATTGACAAGTTTTCTGTCGATGCCGGTCACACGTTTTTTGGCAGATATGCTGTTTGATCACGATGAG AAGATGATTCTGCCGTCGTTTGGGGGGTCTACCGGCATCATGTTGGTAGCGGGCGCGGTGTTGTACACGGTGTTTCTGCT GTTTTCTGGAGCCACGCTGATGCAGGGTGTGTTGTGTTTGTGGCTGTTTCTTGAAATGGTCGTCAACTGGAATGCGATGA GTTATTTGACGGCCATTAAAGATTACAAAAGCATTCTGTATTCTTTTGTTGCGGCGGTGCTGGTGGCGTTCGTCACGTCA TGCGTGTTGCTTGCGTTGGCATGCCCTCCTGTGGAGTCGCTGTTGTTCGCAGTGGTGCTTGGCTATGGTGTGATGCTGGT GTGGGATGTACTCTTGTTGCATCGTTATTTTCCGCAAAGTCGTGAGCATCCGTGGCTGTTTCTGCAGTGGGTCGATCAGT TTCTGCCGTTGGCGTTGACCGGATTGTTCACCACTATCGGCCTGTTCGCCCATTTGGTGATCACTTGGTGTGGACCTCTT GGTATCAAGGTGAAGGGTTTGTTTTATGGTGCGCCATATTACGATGTGCCCGCCATGCTGGCGTTTTTGACGATTCTGAT CACCACGGTGAATTTTGTGGTGTCGGTGGAGGTCAATTTCTACCCAACATATCGGTCGTATTACAGTTTGTTGAATGATG GAGGCACGGTCAAAGACATTACCGTCGCCGAAAACGAAATGCTGGCTGTGCTCAATCGAGAATTGCATTACACGGCATTG AAGCAATTGCTGGTGACCGCTGCCGTGATTTCGTTGGAAAAAACAGTGCTGAACGCGCTTCCTTTGGGTTTCAACGATGT GATGCACGGATATTTCCGTGTGCTCTGCGTGGGGTATGCCCTTTATGCGGTCGGCAACACCGTGATGCTGATTCTGCTGT ATTTCACCGATTATTCCGGTGCGTTGACGGCATCGGCATTGTTTGCCGTTTCAACGGTTGTGTTCACGGTGATCAGTCAG TTTTTCACTACGACACTGTTCGGTTTCGGTTTCCTGATGGGCGCTTCGTTGTTTGCCATATACGCGACTTTCCGTCTCGC CTCATATACCGACAATCTTCCGTACCGAGTATTGGGGCAGCAGCCGATTGTGGCGCAAACAAAGCGGGGACGTTTCACGG AATTGGGCATACTGCTTGAACGTGGCGAACAGCGGATCGACCAATCATTGCATCGTCCAAGGCATGCACGGTCTTCTAAC AAGGCGAATAATGCAGAAAACGGATGGCATAATCGGGAGGAATCGTAA
Upstream 100 bases:
>100_bases CGCAAGCTGTATGCCGATACCGCGGATCAGTTCGGATTGGAACGCTGATATGGCCGGTATTGGATTTGAACTGAAGAAAC TGTTCCATCGTAGGGGCTTG
Downstream 100 bases:
>100_bases ATCATGACATGGTGGAATCGACGCAGCGCAAAAGCCATTACCGCGCTTGTCAAGCGGATAGCGGCATTGATGGCAATACT GACGGTGCTTTCCTGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Transmembrane Protein Cog; Polysaccharide Synthase Transmembrane Protein
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MAMLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLSSLVLTSFLSMPVTRFLADMLFDHDE KMILPSFGGSTGIMLVAGAVLYTVFLLFSGATLMQGVLCLWLFLEMVVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTS CVLLALACPPVESLLFAVVLGYGVMLVWDVLLLHRYFPQSREHPWLFLQWVDQFLPLALTGLFTTIGLFAHLVITWCGPL GIKVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDITVAENEMLAVLNRELHYTAL KQLLVTAAVISLEKTVLNALPLGFNDVMHGYFRVLCVGYALYAVGNTVMLILLYFTDYSGALTASALFAVSTVVFTVISQ FFTTTLFGFGFLMGASLFAIYATFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLERGEQRIDQSLHRPRHARSSN KANNAENGWHNREES
Sequences:
>Translated_495_residues MAMLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLSSLVLTSFLSMPVTRFLADMLFDHDE KMILPSFGGSTGIMLVAGAVLYTVFLLFSGATLMQGVLCLWLFLEMVVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTS CVLLALACPPVESLLFAVVLGYGVMLVWDVLLLHRYFPQSREHPWLFLQWVDQFLPLALTGLFTTIGLFAHLVITWCGPL GIKVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDITVAENEMLAVLNRELHYTAL KQLLVTAAVISLEKTVLNALPLGFNDVMHGYFRVLCVGYALYAVGNTVMLILLYFTDYSGALTASALFAVSTVVFTVISQ FFTTTLFGFGFLMGASLFAIYATFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLERGEQRIDQSLHRPRHARSSN KANNAENGWHNREES >Mature_494_residues AMLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLSSLVLTSFLSMPVTRFLADMLFDHDEK MILPSFGGSTGIMLVAGAVLYTVFLLFSGATLMQGVLCLWLFLEMVVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTSC VLLALACPPVESLLFAVVLGYGVMLVWDVLLLHRYFPQSREHPWLFLQWVDQFLPLALTGLFTTIGLFAHLVITWCGPLG IKVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDITVAENEMLAVLNRELHYTALK QLLVTAAVISLEKTVLNALPLGFNDVMHGYFRVLCVGYALYAVGNTVMLILLYFTDYSGALTASALFAVSTVVFTVISQF FTTTLFGFGFLMGASLFAIYATFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLERGEQRIDQSLHRPRHARSSNK ANNAENGWHNREES
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55118; Mature: 54987
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLSSLVLT CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SFLSMPVTRFLADMLFDHDEKMILPSFGGSTGIMLVAGAVLYTVFLLFSGATLMQGVLCL HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH WLFLEMVVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTSCVLLALACPPVESLLFAVVL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GYGVMLVWDVLLLHRYFPQSREHPWLFLQWVDQFLPLALTGLFTTIGLFAHLVITWCGPL HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIKVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDI CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHCCCCCEEEE TVAENEMLAVLNRELHYTALKQLLVTAAVISLEKTVLNALPLGFNDVMHGYFRVLCVGYA EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYAVGNTVMLILLYFTDYSGALTASALFAVSTVVFTVISQFFTTTLFGFGFLMGASLFAI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLERGEQRIDQSLHRPRHARSSN HHHHHHHHHCCCCCEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC KANNAENGWHNREES CCCCCCCCCCCCCCC >Mature Secondary Structure AMLRAYGYAGVICAGPMLLGVLLQFGVLIVSSWWQVGRPDRDLLVCMITYTLLSSLVLT CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH SFLSMPVTRFLADMLFDHDEKMILPSFGGSTGIMLVAGAVLYTVFLLFSGATLMQGVLCL HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH WLFLEMVVNWNAMSYLTAIKDYKSILYSFVAAVLVAFVTSCVLLALACPPVESLLFAVVL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH GYGVMLVWDVLLLHRYFPQSREHPWLFLQWVDQFLPLALTGLFTTIGLFAHLVITWCGPL HHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GIKVKGLFYGAPYYDVPAMLAFLTILITTVNFVVSVEVNFYPTYRSYYSLLNDGGTVKDI CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHCCCCCEEEE TVAENEMLAVLNRELHYTALKQLLVTAAVISLEKTVLNALPLGFNDVMHGYFRVLCVGYA EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYAVGNTVMLILLYFTDYSGALTASALFAVSTVVFTVISQFFTTTLFGFGFLMGASLFAI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YATFRLASYTDNLPYRVLGQQPIVAQTKRGRFTELGILLERGEQRIDQSLHRPRHARSSN HHHHHHHHHCCCCCEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC KANNAENGWHNREES CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA